Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RIPK2O43353 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.39■□□□□ 0.53
RIPK2O43353 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RIPK2O43353 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RIPK2O43353 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.39■□□□□ 0.53
RIPK2O43353 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.39■□□□□ 0.53
RIPK2O43353 MIR4674-201ENST00000582457 87 ntBASIC18.39■□□□□ 0.53
RIPK2O43353 AF186192.3-201ENST00000583427 947 ntBASIC18.39■□□□□ 0.53
RIPK2O43353 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.39■□□□□ 0.53
RIPK2O43353 AC073195.1-201ENST00000607241 877 ntBASIC18.39■□□□□ 0.53
RIPK2O43353 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RIPK2O43353 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RIPK2O43353 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.39■□□□□ 0.53
RIPK2O43353 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RIPK2O43353 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RIPK2O43353 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RIPK2O43353 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RIPK2O43353 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RIPK2O43353 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RIPK2O43353 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RIPK2O43353 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.39■□□□□ 0.53
RIPK2O43353 FSCN1P1-201ENST00000568912 1481 ntBASIC18.39■□□□□ 0.53
RIPK2O43353 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RIPK2O43353 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RIPK2O43353 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.38■□□□□ 0.53
RIPK2O43353 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 AL355802.2-201ENST00000402069 882 ntBASIC18.38■□□□□ 0.53
RIPK2O43353 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RIPK2O43353 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RIPK2O43353 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.38■□□□□ 0.53
RIPK2O43353 DUTP2-201ENST00000519164 463 ntBASIC18.38■□□□□ 0.53
RIPK2O43353 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.38■□□□□ 0.53
RIPK2O43353 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RIPK2O43353 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.38■□□□□ 0.53
RIPK2O43353 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RIPK2O43353 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 AL118508.1-201ENST00000613502 2345 ntBASIC18.38■□□□□ 0.53
RIPK2O43353 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.38■□□□□ 0.53
RIPK2O43353 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIPK2O43353 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.37■□□□□ 0.53
RIPK2O43353 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.37■□□□□ 0.53
RIPK2O43353 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.37■□□□□ 0.53
RIPK2O43353 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RIPK2O43353 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.37■□□□□ 0.53
RIPK2O43353 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.37■□□□□ 0.53
RIPK2O43353 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.37■□□□□ 0.53
RIPK2O43353 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.37■□□□□ 0.53
RIPK2O43353 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.37■□□□□ 0.53
RIPK2O43353 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RIPK2O43353 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.37■□□□□ 0.53
RIPK2O43353 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RIPK2O43353 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.37■□□□□ 0.53
RIPK2O43353 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RIPK2O43353 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
RIPK2O43353 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RIPK2O43353 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RIPK2O43353 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.36■□□□□ 0.53
RIPK2O43353 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.36■□□□□ 0.53
RIPK2O43353 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.36■□□□□ 0.53
RIPK2O43353 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.36■□□□□ 0.53
RIPK2O43353 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RIPK2O43353 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.36■□□□□ 0.53
RIPK2O43353 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.36■□□□□ 0.53
RIPK2O43353 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.36■□□□□ 0.53
RIPK2O43353 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms