Protein–RNA interactions for Protein: O15467

CCL16, C-C motif chemokine 16, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16O15467 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL16O15467 AC104109.2-201ENST00000602919 1418 ntBASIC18.81■□□□□ 0.6
CCL16O15467 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL16O15467 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CCL16O15467 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CCL16O15467 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL16O15467 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCL16O15467 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL16O15467 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL16O15467 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL16O15467 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.8■□□□□ 0.6
CCL16O15467 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.8■□□□□ 0.6
CCL16O15467 AC025062.2-201ENST00000605477 670 ntBASIC18.8■□□□□ 0.6
CCL16O15467 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL16O15467 HLA-J-201ENST00000462773 1622 ntBASIC18.8■□□□□ 0.6
CCL16O15467 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.8■□□□□ 0.6
CCL16O15467 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL16O15467 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL16O15467 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL16O15467 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL16O15467 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL16O15467 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL16O15467 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 AC132938.6-201ENST00000623828 1655 ntBASIC18.79■□□□□ 0.6
CCL16O15467 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL16O15467 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL16O15467 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 MIR1233-2-201ENST00000408138 82 ntBASIC18.79■□□□□ 0.6
CCL16O15467 MIR1233-1-201ENST00000408722 82 ntBASIC18.79■□□□□ 0.6
CCL16O15467 BX842568.4-201ENST00000421222 227 ntBASIC18.79■□□□□ 0.6
CCL16O15467 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL16O15467 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL16O15467 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCL16O15467 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCL16O15467 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 IGHV3-22-201ENST00000520721 359 ntBASIC18.79■□□□□ 0.6
CCL16O15467 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCL16O15467 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL16O15467 NKAPP1-205ENST00000585790 367 ntBASIC18.79■□□□□ 0.6
CCL16O15467 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL16O15467 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL16O15467 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL16O15467 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CCL16O15467 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL16O15467 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL16O15467 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL16O15467 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCL16O15467 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCL16O15467 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL16O15467 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCL16O15467 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL16O15467 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CCL16O15467 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL16O15467 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCL16O15467 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL16O15467 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL16O15467 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.78■□□□□ 0.6
CCL16O15467 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 AC098831.1-202ENST00000438821 336 ntBASIC18.78■□□□□ 0.6
CCL16O15467 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.78■□□□□ 0.6
CCL16O15467 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL16O15467 AL139288.1-201ENST00000623748 933 ntBASIC18.78■□□□□ 0.6
CCL16O15467 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL16O15467 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL16O15467 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL16O15467 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCL16O15467 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCL16O15467 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 ESPNP-201ENST00000270691 2015 ntBASIC18.78■□□□□ 0.6
CCL16O15467 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL16O15467 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.77■□□□□ 0.6
CCL16O15467 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms