Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.12■□□□□ 0.49
COPEO14579 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COPEO14579 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.12■□□□□ 0.49
COPEO14579 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
COPEO14579 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 MESTP1-201ENST00000404287 994 ntBASIC18.12■□□□□ 0.49
COPEO14579 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.12■□□□□ 0.49
COPEO14579 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.12■□□□□ 0.49
COPEO14579 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.12■□□□□ 0.49
COPEO14579 C1QBPP2-201ENST00000528754 825 ntBASIC18.12■□□□□ 0.49
COPEO14579 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.12■□□□□ 0.49
COPEO14579 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.12■□□□□ 0.49
COPEO14579 AC006058.3-201ENST00000606217 1069 ntBASIC18.12■□□□□ 0.49
COPEO14579 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.12■□□□□ 0.49
COPEO14579 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.12■□□□□ 0.49
COPEO14579 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COPEO14579 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPEO14579 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
COPEO14579 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COPEO14579 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
COPEO14579 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COPEO14579 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COPEO14579 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COPEO14579 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.11■□□□□ 0.49
COPEO14579 RARRES2P10-201ENST00000564312 460 ntBASIC18.11■□□□□ 0.49
COPEO14579 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.11■□□□□ 0.49
COPEO14579 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.11■□□□□ 0.49
COPEO14579 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COPEO14579 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
COPEO14579 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPEO14579 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.1■□□□□ 0.49
COPEO14579 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.1■□□□□ 0.49
COPEO14579 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.1■□□□□ 0.49
COPEO14579 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 MFAP1P1-201ENST00000442257 1255 ntBASIC18.1■□□□□ 0.49
COPEO14579 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.1■□□□□ 0.49
COPEO14579 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.1■□□□□ 0.49
COPEO14579 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.1■□□□□ 0.49
COPEO14579 SLC25A1P4-201ENST00000567977 778 ntBASIC18.1■□□□□ 0.49
COPEO14579 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.1■□□□□ 0.49
COPEO14579 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 AD000864.1-201ENST00000624076 2295 ntBASIC18.1■□□□□ 0.49
COPEO14579 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
COPEO14579 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.1■□□□□ 0.49
COPEO14579 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPEO14579 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.09■□□□□ 0.49
COPEO14579 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COPEO14579 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.09■□□□□ 0.49
COPEO14579 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPEO14579 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms