Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRDV1A0A1B0GX56 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 AC099343.3-201ENST00000605834 2503 ntBASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 AC004951.3-201ENST00000418645 1148 ntBASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRDV1A0A1B0GX56 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 AL023284.2-201ENST00000405850 579 ntBASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 MCCD1P1-208ENST00000445732 328 ntBASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 KRT16P5-201ENST00000455284 522 ntBASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 AL162430.1-201ENST00000480705 870 ntBASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 DUTP2-201ENST00000519164 463 ntBASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRDV1A0A1B0GX56 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 AL139384.1-201ENST00000612143 3047 ntBASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRDV1A0A1B0GX56 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms