Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC163A0A0D9SF12 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 SNHG9-202ENST00000564014 471 ntBASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC163A0A0D9SF12 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC163A0A0D9SF12 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC163A0A0D9SF12 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC163A0A0D9SF12 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC163A0A0D9SF12 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC163A0A0D9SF12 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC163A0A0D9SF12 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC163A0A0D9SF12 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC163A0A0D9SF12 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 AC103564.2-201ENST00000432853 1299 ntBASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC163A0A0D9SF12 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 MKNK2P1-201ENST00000437526 628 ntBASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 METTL21AP1-201ENST00000438852 635 ntBASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 RFPL4AP1-201ENST00000530883 850 ntBASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC163A0A0D9SF12 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 SPDYE21P-201ENST00000413323 827 ntBASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 CYMP-203ENST00000474680 1263 ntBASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 C20orf181-201ENST00000623918 480 ntBASIC17.81■□□□□ 0.44
CCDC163A0A0D9SF12 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms