Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim32Q8CH72 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim32Q8CH72 Gm14117-201ENSMUST00000122417 843 ntBASIC25.57■■□□□ 1.68
Trim32Q8CH72 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.57■■□□□ 1.68
Trim32Q8CH72 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Trim32Q8CH72 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim32Q8CH72 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
Trim32Q8CH72 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Trim32Q8CH72 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.56■■□□□ 1.68
Trim32Q8CH72 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim32Q8CH72 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Trim32Q8CH72 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim32Q8CH72 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim32Q8CH72 Gm45444-201ENSMUST00000211394 898 ntBASIC25.55■■□□□ 1.68
Trim32Q8CH72 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim32Q8CH72 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.54■■□□□ 1.68
Trim32Q8CH72 Gm45102-201ENSMUST00000207427 857 ntBASIC25.54■■□□□ 1.68
Trim32Q8CH72 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Trim32Q8CH72 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim32Q8CH72 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim32Q8CH72 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim32Q8CH72 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Trim32Q8CH72 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.53■■□□□ 1.68
Trim32Q8CH72 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim32Q8CH72 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trim32Q8CH72 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Trim32Q8CH72 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trim32Q8CH72 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Trim32Q8CH72 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trim32Q8CH72 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim32Q8CH72 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim32Q8CH72 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim32Q8CH72 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim32Q8CH72 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.49■■□□□ 1.67
Trim32Q8CH72 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim32Q8CH72 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.49■■□□□ 1.67
Trim32Q8CH72 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Trim32Q8CH72 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim32Q8CH72 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim32Q8CH72 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Trim32Q8CH72 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.48■■□□□ 1.67
Trim32Q8CH72 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Trim32Q8CH72 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim32Q8CH72 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trim32Q8CH72 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
Trim32Q8CH72 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Trim32Q8CH72 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Trim32Q8CH72 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trim32Q8CH72 Gm9959-201ENSMUST00000068277 390 ntBASIC25.46■■□□□ 1.67
Trim32Q8CH72 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.45■■□□□ 1.66
Trim32Q8CH72 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Trim32Q8CH72 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trim32Q8CH72 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.44■■□□□ 1.66
Trim32Q8CH72 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Trim32Q8CH72 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Trim32Q8CH72 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim32Q8CH72 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim32Q8CH72 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Trim32Q8CH72 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Trim32Q8CH72 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.43■■□□□ 1.66
Trim32Q8CH72 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim32Q8CH72 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim32Q8CH72 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim32Q8CH72 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Trim32Q8CH72 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim32Q8CH72 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim32Q8CH72 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Trim32Q8CH72 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trim32Q8CH72 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trim32Q8CH72 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.4■■□□□ 1.66
Trim32Q8CH72 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Trim32Q8CH72 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.39■■□□□ 1.66
Trim32Q8CH72 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.38■■□□□ 1.65
Trim32Q8CH72 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.38■■□□□ 1.65
Trim32Q8CH72 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.38■■□□□ 1.65
Trim32Q8CH72 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Trim32Q8CH72 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim32Q8CH72 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Trim32Q8CH72 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim32Q8CH72 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim32Q8CH72 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Trim32Q8CH72 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.37■■□□□ 1.65
Trim32Q8CH72 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Trim32Q8CH72 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Trim32Q8CH72 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim32Q8CH72 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.36■■□□□ 1.65
Trim32Q8CH72 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.36■■□□□ 1.65
Trim32Q8CH72 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim32Q8CH72 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim32Q8CH72 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim32Q8CH72 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.36■■□□□ 1.65
Trim32Q8CH72 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Trim32Q8CH72 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trim32Q8CH72 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Trim32Q8CH72 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Trim32Q8CH72 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trim32Q8CH72 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trim32Q8CH72 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Trim32Q8CH72 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim32Q8CH72 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms