Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rft1Q8C3B8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rft1Q8C3B8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rft1Q8C3B8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rft1Q8C3B8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Rft1Q8C3B8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rft1Q8C3B8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rft1Q8C3B8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rft1Q8C3B8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rft1Q8C3B8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rft1Q8C3B8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rft1Q8C3B8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rft1Q8C3B8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.86■□□□□ 0.77
Rft1Q8C3B8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rft1Q8C3B8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rft1Q8C3B8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.85■□□□□ 0.77
Rft1Q8C3B8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rft1Q8C3B8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rft1Q8C3B8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rft1Q8C3B8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rft1Q8C3B8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rft1Q8C3B8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rft1Q8C3B8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rft1Q8C3B8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rft1Q8C3B8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.84■□□□□ 0.77
Rft1Q8C3B8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rft1Q8C3B8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
Rft1Q8C3B8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
Rft1Q8C3B8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.83■□□□□ 0.77
Rft1Q8C3B8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rft1Q8C3B8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rft1Q8C3B8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Rft1Q8C3B8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rft1Q8C3B8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rft1Q8C3B8 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.82■□□□□ 0.76
Rft1Q8C3B8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rft1Q8C3B8 Gm11599-201ENSMUST00000118720 878 ntBASIC19.8■□□□□ 0.76
Rft1Q8C3B8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.8■□□□□ 0.76
Rft1Q8C3B8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rft1Q8C3B8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rft1Q8C3B8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rft1Q8C3B8 Particl-201ENSMUST00000205370 1560 ntBASIC19.78■□□□□ 0.76
Rft1Q8C3B8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.78■□□□□ 0.76
Rft1Q8C3B8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rft1Q8C3B8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rft1Q8C3B8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rft1Q8C3B8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rft1Q8C3B8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rft1Q8C3B8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rft1Q8C3B8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rft1Q8C3B8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Rft1Q8C3B8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.77■□□□□ 0.76
Rft1Q8C3B8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rft1Q8C3B8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rft1Q8C3B8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rft1Q8C3B8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rft1Q8C3B8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rft1Q8C3B8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rft1Q8C3B8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rft1Q8C3B8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rft1Q8C3B8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rft1Q8C3B8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rft1Q8C3B8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rft1Q8C3B8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.74■□□□□ 0.75
Rft1Q8C3B8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rft1Q8C3B8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rft1Q8C3B8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rft1Q8C3B8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rft1Q8C3B8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Rft1Q8C3B8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.73■□□□□ 0.75
Rft1Q8C3B8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rft1Q8C3B8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rft1Q8C3B8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rft1Q8C3B8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rft1Q8C3B8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rft1Q8C3B8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rft1Q8C3B8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rft1Q8C3B8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rft1Q8C3B8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rft1Q8C3B8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rft1Q8C3B8 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.71■□□□□ 0.75
Rft1Q8C3B8 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.71■□□□□ 0.75
Rft1Q8C3B8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rft1Q8C3B8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rft1Q8C3B8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.71■□□□□ 0.75
Rft1Q8C3B8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
Rft1Q8C3B8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.7■□□□□ 0.74
Rft1Q8C3B8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rft1Q8C3B8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rft1Q8C3B8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms