Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 TRS31YDR472W 852 nt5.86□□□□□ -1.47
VPS28Q02767 HSP12YFL014W 330 nt5.86□□□□□ -1.47
VPS28Q02767 CTF8YHR191C 402 nt5.86□□□□□ -1.47
VPS28Q02767 DAL4YIR028W 1908 nt5.86□□□□□ -1.47
VPS28Q02767 FCY22YER060W-A 1593 nt5.85□□□□□ -1.47
VPS28Q02767 YML122CYML122C 381 nt5.85□□□□□ -1.47
VPS28Q02767 YPL247CYPL247C 1572 nt5.84□□□□□ -1.47
VPS28Q02767 ERP2YAL007C 648 nt5.84□□□□□ -1.47
VPS28Q02767 RPL5YPL131W 894 nt5.84□□□□□ -1.47
VPS28Q02767 CEF1YMR213W 1773 nt5.84□□□□□ -1.47
VPS28Q02767 NFS1YCL017C 1494 nt5.83□□□□□ -1.48
VPS28Q02767 MIP1YOR330C 3765 nt5.83□□□□□ -1.48
VPS28Q02767 CYC8YBR112C 2901 nt5.82□□□□□ -1.48
VPS28Q02767 PEX31YGR004W 1389 nt5.82□□□□□ -1.48
VPS28Q02767 YPQ2YDR352W 954 nt5.82□□□□□ -1.48
VPS28Q02767 DOC1YGL240W 753 nt5.82□□□□□ -1.48
VPS28Q02767 MPE1YKL059C 1326 nt5.8□□□□□ -1.48
VPS28Q02767 YFL013W-AYFL013W-A 804 nt5.8□□□□□ -1.48
VPS28Q02767 YIL055CYIL055C 1884 nt5.79□□□□□ -1.48
VPS28Q02767 DYS1YHR068W 1164 nt5.79□□□□□ -1.48
VPS28Q02767 GCN3YKR026C 918 nt5.79□□□□□ -1.48
VPS28Q02767 YHR131CYHR131C 2553 nt5.79□□□□□ -1.48
VPS28Q02767 KNS1YLL019C 2214 nt5.79□□□□□ -1.48
VPS28Q02767 MLS1YNL117W 1665 nt5.79□□□□□ -1.48
VPS28Q02767 URH1YDR400W 1023 nt5.78□□□□□ -1.48
VPS28Q02767 HIS1YER055C 894 nt5.78□□□□□ -1.48
VPS28Q02767 tL(UAA)B1tL(UAA)B1 84 nt5.78□□□□□ -1.48
VPS28Q02767 tL(UAA)B2tL(UAA)B2 84 nt5.78□□□□□ -1.48
VPS28Q02767 tL(UAA)DtL(UAA)D 84 nt5.78□□□□□ -1.48
VPS28Q02767 SUP51tL(UAA)J 84 nt5.78□□□□□ -1.48
VPS28Q02767 tL(UAA)KtL(UAA)K 84 nt5.78□□□□□ -1.48
VPS28Q02767 tL(UAA)LtL(UAA)L 84 nt5.78□□□□□ -1.48
VPS28Q02767 tL(UAA)NtL(UAA)N 84 nt5.78□□□□□ -1.48
VPS28Q02767 FUS3YBL016W 1062 nt5.78□□□□□ -1.48
VPS28Q02767 SPG5YMR191W 1122 nt5.78□□□□□ -1.48
VPS28Q02767 PHO3YBR092C 1404 nt5.78□□□□□ -1.48
VPS28Q02767 FRE5YOR384W 2085 nt5.78□□□□□ -1.48
VPS28Q02767 TUB1YML085C 1344 nt5.77□□□□□ -1.49
VPS28Q02767 PLB2YMR006C 2121 nt5.77□□□□□ -1.49
VPS28Q02767 YPR204WYPR204W 3099 nt5.77□□□□□ -1.49
VPS28Q02767 YIA6YIL006W 1122 nt5.77□□□□□ -1.49
VPS28Q02767 POP1YNL221C 2628 nt5.77□□□□□ -1.49
VPS28Q02767 ISC1YER019W 1434 nt5.76□□□□□ -1.49
VPS28Q02767 BRN1YBL097W 2265 nt5.76□□□□□ -1.49
VPS28Q02767 YDL177CYDL177C 513 nt5.76□□□□□ -1.49
VPS28Q02767 YJL144WYJL144W 315 nt5.76□□□□□ -1.49
VPS28Q02767 EFT2YDR385W 2529 nt5.76□□□□□ -1.49
VPS28Q02767 EFT1YOR133W 2529 nt5.76□□□□□ -1.49
VPS28Q02767 SKI2YLR398C 3864 nt5.75□□□□□ -1.49
VPS28Q02767 YSC83YHR017W 1158 nt5.75□□□□□ -1.49
VPS28Q02767 CBR1YIL043C 855 nt5.75□□□□□ -1.49
VPS28Q02767 CUE4YML101C 354 nt5.75□□□□□ -1.49
VPS28Q02767 YGR127WYGR127W 939 nt5.74□□□□□ -1.49
VPS28Q02767 REC107YJR021C 945 nt5.74□□□□□ -1.49
VPS28Q02767 YJR107WYJR107W 987 nt5.74□□□□□ -1.49
VPS28Q02767 YKR032WYKR032W 315 nt5.74□□□□□ -1.49
VPS28Q02767 RPL31BYLR406C 342 nt5.74□□□□□ -1.49
VPS28Q02767 TOS6YNL300W 309 nt5.74□□□□□ -1.49
VPS28Q02767 NTG2YOL043C 1143 nt5.74□□□□□ -1.49
VPS28Q02767 IRC11YOR013W 471 nt5.74□□□□□ -1.49
VPS28Q02767 ADH5YBR145W 1056 nt5.74□□□□□ -1.49
VPS28Q02767 RIO1YOR119C 1455 nt5.74□□□□□ -1.49
VPS28Q02767 ACS1YAL054C 2142 nt5.74□□□□□ -1.49
VPS28Q02767 NAF1YNL124W 1479 nt5.73□□□□□ -1.49
VPS28Q02767 GET4YOR164C 939 nt5.73□□□□□ -1.49
VPS28Q02767 YMR034CYMR034C 1305 nt5.73□□□□□ -1.49
VPS28Q02767 RAP1YNL216W 2484 nt5.72□□□□□ -1.49
VPS28Q02767 ATP23YNR020C 813 nt5.72□□□□□ -1.49
VPS28Q02767 LAG2YOL025W 1983 nt5.72□□□□□ -1.49
VPS28Q02767 GPA1YHR005C 1419 nt5.72□□□□□ -1.49
VPS28Q02767 DML1YMR211W 1428 nt5.72□□□□□ -1.49
VPS28Q02767 PET494YNR045W 1470 nt5.71□□□□□ -1.49
VPS28Q02767 SLX5YDL013W 1860 nt5.71□□□□□ -1.5
VPS28Q02767 snR82snR82 268 nt5.71□□□□□ -1.5
VPS28Q02767 MRPS28YDR337W 861 nt5.71□□□□□ -1.5
VPS28Q02767 YDR415CYDR415C 1125 nt5.71□□□□□ -1.5
VPS28Q02767 SUF5tG(CCC)O 72 nt5.71□□□□□ -1.5
VPS28Q02767 PTC7YHR076W 1032 nt5.71□□□□□ -1.5
VPS28Q02767 YUR1YJL139C 1287 nt5.71□□□□□ -1.5
VPS28Q02767 YPR130CYPR130C 408 nt5.71□□□□□ -1.5
VPS28Q02767 ARG81YML099C 2643 nt5.71□□□□□ -1.5
VPS28Q02767 RGT2YDL138W 2292 nt5.71□□□□□ -1.5
VPS28Q02767 HXK2YGL253W 1461 nt5.71□□□□□ -1.5
VPS28Q02767 tG(GCC)BtG(GCC)B 71 nt5.7□□□□□ -1.5
VPS28Q02767 SUF16tG(GCC)C 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)D1tG(GCC)D1 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)D2tG(GCC)D2 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)EtG(GCC)E 71 nt5.7□□□□□ -1.5
VPS28Q02767 SUF20tG(GCC)F1 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)F2tG(GCC)F2 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)G1tG(GCC)G1 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)G2tG(GCC)G2 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)J1tG(GCC)J1 71 nt5.7□□□□□ -1.5
VPS28Q02767 SUF23tG(GCC)J2 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)MtG(GCC)M 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)O1tG(GCC)O1 71 nt5.7□□□□□ -1.5
VPS28Q02767 SUF17tG(GCC)O2 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)P1tG(GCC)P1 71 nt5.7□□□□□ -1.5
VPS28Q02767 tG(GCC)P2tG(GCC)P2 71 nt5.7□□□□□ -1.5
VPS28Q02767 THI4YGR144W 981 nt5.7□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms