Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 HOG1YLR113W 1308 nt5.71□□□□□ -1.5
CDC40P40968 ENP1YBR247C 1452 nt5.71□□□□□ -1.5
CDC40P40968 YDR401WYDR401W 564 nt5.7□□□□□ -1.5
CDC40P40968 YPL108WYPL108W 507 nt5.7□□□□□ -1.5
CDC40P40968 HBN1YCL026C-B 582 nt5.7□□□□□ -1.5
CDC40P40968 DRS1YLL008W 2259 nt5.7□□□□□ -1.5
CDC40P40968 CEM1YER061C 1329 nt5.7□□□□□ -1.5
CDC40P40968 LAG2YOL025W 1983 nt5.69□□□□□ -1.5
CDC40P40968 YIR020W-AYIR020W-A 243 nt5.69□□□□□ -1.5
CDC40P40968 TIF2YJL138C 1188 nt5.69□□□□□ -1.5
CDC40P40968 TIF1YKR059W 1188 nt5.69□□□□□ -1.5
CDC40P40968 DFR1YOR236W 636 nt5.69□□□□□ -1.5
CDC40P40968 PRE10YOR362C 867 nt5.69□□□□□ -1.5
CDC40P40968 IMA2YOL157C 1770 nt5.69□□□□□ -1.5
CDC40P40968 SEC18YBR080C 2277 nt5.68□□□□□ -1.5
CDC40P40968 CEF1YMR213W 1773 nt5.68□□□□□ -1.5
CDC40P40968 TIM50YPL063W 1431 nt5.68□□□□□ -1.5
CDC40P40968 TGA1tA(UGC)A 73 nt5.68□□□□□ -1.5
CDC40P40968 tA(UGC)EtA(UGC)E 73 nt5.68□□□□□ -1.5
CDC40P40968 tA(UGC)GtA(UGC)G 73 nt5.68□□□□□ -1.5
CDC40P40968 tA(UGC)LtA(UGC)L 73 nt5.68□□□□□ -1.5
CDC40P40968 tA(UGC)OtA(UGC)O 73 nt5.68□□□□□ -1.5
CDC40P40968 CPR2YHR057C 618 nt5.68□□□□□ -1.5
CDC40P40968 IES1YFL013C 2079 nt5.68□□□□□ -1.5
CDC40P40968 SUN4YNL066W 1263 nt5.67□□□□□ -1.5
CDC40P40968 YNR014WYNR014W 639 nt5.67□□□□□ -1.5
CDC40P40968 ATG7YHR171W 1893 nt5.66□□□□□ -1.5
CDC40P40968 ISC1YER019W 1434 nt5.66□□□□□ -1.5
CDC40P40968 PET18YCR020C 648 nt5.66□□□□□ -1.5
CDC40P40968 COX16YJL003W 357 nt5.66□□□□□ -1.5
CDC40P40968 HXT2YMR011W 1626 nt5.66□□□□□ -1.5
CDC40P40968 TDP1YBR223C 1635 nt5.66□□□□□ -1.5
CDC40P40968 SRP101YDR292C 1866 nt5.65□□□□□ -1.5
CDC40P40968 MRPL28YDR462W 444 nt5.65□□□□□ -1.5
CDC40P40968 OPI1YHL020C 1215 nt5.65□□□□□ -1.5
CDC40P40968 SOD2YHR008C 702 nt5.65□□□□□ -1.5
CDC40P40968 RDL2YOR286W 450 nt5.65□□□□□ -1.5
CDC40P40968 PHO85YPL031C 918 nt5.65□□□□□ -1.5
CDC40P40968 CHL4YDR254W 1377 nt5.65□□□□□ -1.51
CDC40P40968 RDR1YOR380W 1641 nt5.64□□□□□ -1.51
CDC40P40968 YUR1YJL139C 1287 nt5.64□□□□□ -1.51
CDC40P40968 PMU1YKL128C 888 nt5.64□□□□□ -1.51
CDC40P40968 FCY1YPR062W 477 nt5.64□□□□□ -1.51
CDC40P40968 TOS1YBR162C 1368 nt5.64□□□□□ -1.51
CDC40P40968 VPS72YDR485C 2388 nt5.64□□□□□ -1.51
CDC40P40968 CDC7YDL017W 1524 nt5.64□□□□□ -1.51
CDC40P40968 PCS60YBR222C 1632 nt5.63□□□□□ -1.51
CDC40P40968 ORM1YGR038W 669 nt5.63□□□□□ -1.51
CDC40P40968 GPT2YKR067W 2232 nt5.62□□□□□ -1.51
CDC40P40968 RAP1YNL216W 2484 nt5.62□□□□□ -1.51
CDC40P40968 YMR206WYMR206W 942 nt5.62□□□□□ -1.51
CDC40P40968 RPL5YPL131W 894 nt5.62□□□□□ -1.51
CDC40P40968 MHP1YJL042W 4197 nt5.62□□□□□ -1.51
CDC40P40968 SLA2YNL243W 2907 nt5.62□□□□□ -1.51
CDC40P40968 JHD1YER051W 1479 nt5.62□□□□□ -1.51
CDC40P40968 HXK2YGL253W 1461 nt5.62□□□□□ -1.51
CDC40P40968 SIT1YEL065W 1887 nt5.62□□□□□ -1.51
CDC40P40968 IRC5YFR038W 2562 nt5.61□□□□□ -1.51
CDC40P40968 BDS1YOL164W 1941 nt5.61□□□□□ -1.51
CDC40P40968 YPR084WYPR084W 1371 nt5.61□□□□□ -1.51
CDC40P40968 PGI1YBR196C 1665 nt5.61□□□□□ -1.51
CDC40P40968 DDC1YPL194W 1839 nt5.6□□□□□ -1.51
CDC40P40968 YER156CYER156C 1017 nt5.59□□□□□ -1.51
CDC40P40968 YGL072CYGL072C 360 nt5.59□□□□□ -1.51
CDC40P40968 YML034C-AYML034C-A 399 nt5.59□□□□□ -1.51
CDC40P40968 RPS6AYPL090C 711 nt5.59□□□□□ -1.51
CDC40P40968 YPR127WYPR127W 1038 nt5.59□□□□□ -1.51
CDC40P40968 RPO26YPR187W 468 nt5.59□□□□□ -1.51
CDC40P40968 RPS6BYBR181C 711 nt5.59□□□□□ -1.51
CDC40P40968 ARG81YML099C 2643 nt5.59□□□□□ -1.52
CDC40P40968 RIO1YOR119C 1455 nt5.58□□□□□ -1.52
CDC40P40968 VMS1YDR049W 1899 nt5.58□□□□□ -1.52
CDC40P40968 CIT2YCR005C 1383 nt5.58□□□□□ -1.52
CDC40P40968 PPH22YDL188C 1134 nt5.58□□□□□ -1.52
CDC40P40968 MED6YHR058C 888 nt5.58□□□□□ -1.52
CDC40P40968 YJL160CYJL160C 864 nt5.58□□□□□ -1.52
CDC40P40968 RDN5-2RDN5-2 119 nt5.58□□□□□ -1.52
CDC40P40968 RDN5-3RDN5-3 119 nt5.58□□□□□ -1.52
CDC40P40968 RDN5-4RDN5-4 119 nt5.58□□□□□ -1.52
CDC40P40968 RDN5-5RDN5-5 119 nt5.58□□□□□ -1.52
CDC40P40968 EIS1YMR031C 2532 nt5.58□□□□□ -1.52
CDC40P40968 STE3YKL178C 1413 nt5.57□□□□□ -1.52
CDC40P40968 SSK1YLR006C 2139 nt5.57□□□□□ -1.52
CDC40P40968 DYS1YHR068W 1164 nt5.57□□□□□ -1.52
CDC40P40968 MIX17YMR002W 471 nt5.57□□□□□ -1.52
CDC40P40968 YIL055CYIL055C 1884 nt5.57□□□□□ -1.52
CDC40P40968 ATP2YJR121W 1536 nt5.57□□□□□ -1.52
CDC40P40968 IVY1YDR229W 1362 nt5.56□□□□□ -1.52
CDC40P40968 BNA5YLR231C 1362 nt5.56□□□□□ -1.52
CDC40P40968 POP1YNL221C 2628 nt5.56□□□□□ -1.52
CDC40P40968 NCS6YGL211W 1080 nt5.56□□□□□ -1.52
CDC40P40968 CCP1YKR066C 1086 nt5.56□□□□□ -1.52
CDC40P40968 MFT1YML062C 1179 nt5.56□□□□□ -1.52
CDC40P40968 GEF1YJR040W 2340 nt5.56□□□□□ -1.52
CDC40P40968 EFT2YDR385W 2529 nt5.55□□□□□ -1.52
CDC40P40968 EFT1YOR133W 2529 nt5.55□□□□□ -1.52
CDC40P40968 YNL295WYNL295W 1575 nt5.55□□□□□ -1.52
CDC40P40968 TKL1YPR074C 2043 nt5.55□□□□□ -1.52
CDC40P40968 MSS116YDR194C 1995 nt5.55□□□□□ -1.52
CDC40P40968 UTP9YHR196W 1728 nt5.55□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 103.8 ms