Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFPL4AA6NLU0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.19■□□□□ 0.98
RFPL4AA6NLU0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.19■□□□□ 0.98
RFPL4AA6NLU0 DUX4L11-201ENST00000611504 1267 ntBASIC21.19■□□□□ 0.98
RFPL4AA6NLU0 DUX4L12-201ENST00000614593 1267 ntBASIC21.19■□□□□ 0.98
RFPL4AA6NLU0 DUX4L14-201ENST00000621227 1267 ntBASIC21.19■□□□□ 0.98
RFPL4AA6NLU0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.18■□□□□ 0.98
RFPL4AA6NLU0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL4AA6NLU0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RFPL4AA6NLU0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL4AA6NLU0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL4AA6NLU0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 DUX4L13-201ENST00000554103 1267 ntBASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 DUX4L15-201ENST00000611059 1267 ntBASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 DUX4L23-201ENST00000615195 1269 ntBASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 DUX4L24-201ENST00000617576 1269 ntBASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 DUX4L22-201ENST00000618238 1269 ntBASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 DUX4L20-201ENST00000619712 1269 ntBASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 DUX4L21-201ENST00000622058 1269 ntBASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 DUX4L10-201ENST00000622460 1267 ntBASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 DUX4L25-201ENST00000624915 1269 ntBASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL4AA6NLU0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL4AA6NLU0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.16■□□□□ 0.98
RFPL4AA6NLU0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL4AA6NLU0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.16■□□□□ 0.98
RFPL4AA6NLU0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL4AA6NLU0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.16■□□□□ 0.98
RFPL4AA6NLU0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RFPL4AA6NLU0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL4AA6NLU0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL4AA6NLU0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.15■□□□□ 0.98
RFPL4AA6NLU0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL4AA6NLU0 AC018358.1-201ENST00000631079 1402 ntBASIC21.15■□□□□ 0.98
RFPL4AA6NLU0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL4AA6NLU0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL4AA6NLU0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.15■□□□□ 0.98
RFPL4AA6NLU0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL4AA6NLU0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFPL4AA6NLU0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFPL4AA6NLU0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFPL4AA6NLU0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFPL4AA6NLU0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.14■□□□□ 0.97
RFPL4AA6NLU0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFPL4AA6NLU0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL4AA6NLU0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL4AA6NLU0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL4AA6NLU0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.13■□□□□ 0.97
RFPL4AA6NLU0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL4AA6NLU0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.11■□□□□ 0.97
RFPL4AA6NLU0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL4AA6NLU0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFPL4AA6NLU0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.1■□□□□ 0.97
RFPL4AA6NLU0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.1■□□□□ 0.97
RFPL4AA6NLU0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFPL4AA6NLU0 AC145676.1-201ENST00000514988 2004 ntBASIC21.1■□□□□ 0.97
RFPL4AA6NLU0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4AA6NLU0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.09■□□□□ 0.97
RFPL4AA6NLU0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RFPL4AA6NLU0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RFPL4AA6NLU0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RFPL4AA6NLU0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4AA6NLU0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFPL4AA6NLU0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL4AA6NLU0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL4AA6NLU0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.08■□□□□ 0.97
RFPL4AA6NLU0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.08■□□□□ 0.97
RFPL4AA6NLU0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.08■□□□□ 0.97
RFPL4AA6NLU0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RFPL4AA6NLU0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RFPL4AA6NLU0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RFPL4AA6NLU0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RFPL4AA6NLU0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RFPL4AA6NLU0 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.07■□□□□ 0.96
RFPL4AA6NLU0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFPL4AA6NLU0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4AA6NLU0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.06■□□□□ 0.96
RFPL4AA6NLU0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4AA6NLU0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.06■□□□□ 0.96
RFPL4AA6NLU0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4AA6NLU0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RFPL4AA6NLU0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.06■□□□□ 0.96
RFPL4AA6NLU0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4AA6NLU0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4AA6NLU0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFPL4AA6NLU0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms