Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CYP46A1Q9Y6A2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CYP46A1Q9Y6A2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
CYP46A1Q9Y6A2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CYP46A1Q9Y6A2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CYP46A1Q9Y6A2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CYP46A1Q9Y6A2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 GCSHP2-201ENST00000560971 527 ntBASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CYP46A1Q9Y6A2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 AC132938.6-201ENST00000623828 1655 ntBASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 AC008687.5-201ENST00000593746 558 ntBASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYP46A1Q9Y6A2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 AC012317.2-201ENST00000623305 2251 ntBASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 LINC00896-202ENST00000609602 2128 ntBASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.49■■□□□ 1.03
CYP46A1Q9Y6A2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 DUTP2-201ENST00000519164 463 ntBASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CYP46A1Q9Y6A2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms