Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA9Q9Y5G4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 NUS1P2-201ENST00000417358 873 ntBASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 MINOS1P3-201ENST00000457048 203 ntBASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 AC120114.3-201ENST00000611923 658 ntBASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 IRX1P1-201ENST00000438849 1838 ntBASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA9Q9Y5G4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 FP475955.4-201ENST00000623131 1990 ntBASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 AL590627.1-203ENST00000421194 1026 ntBASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 TSPY12P-201ENST00000421279 868 ntBASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 AF238378.1-201ENST00000526806 358 ntBASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 AP005901.3-202ENST00000581653 237 ntBASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 AC068587.9-201ENST00000641814 219 ntBASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA9Q9Y5G4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms