Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 AC087623.3-201ENST00000607047 1098 ntBASIC17.15■□□□□ 0.34
AP4S1Q9Y587 MIR6821-201ENST00000617625 74 ntBASIC17.15■□□□□ 0.34
AP4S1Q9Y587 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 CROCCP2-202ENST00000412962 2773 ntBASIC17.15■□□□□ 0.34
AP4S1Q9Y587 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.15■□□□□ 0.34
AP4S1Q9Y587 UBALD1-205ENST00000590891 2641 ntBASIC17.15■□□□□ 0.34
AP4S1Q9Y587 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
AP4S1Q9Y587 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
AP4S1Q9Y587 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
AP4S1Q9Y587 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
AP4S1Q9Y587 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.14■□□□□ 0.34
AP4S1Q9Y587 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
AP4S1Q9Y587 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.14■□□□□ 0.33
AP4S1Q9Y587 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 AC008687.6-201ENST00000596318 630 ntBASIC17.13■□□□□ 0.33
AP4S1Q9Y587 AC092118.2-201ENST00000613495 667 ntBASIC17.13■□□□□ 0.33
AP4S1Q9Y587 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 AL109659.2-201ENST00000606809 1674 ntBASIC17.13■□□□□ 0.33
AP4S1Q9Y587 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4S1Q9Y587 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms