Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZC3H4Q9UPT8 AC009102.3-201ENST00000623118 1491 ntBASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 ACTG1P14-201ENST00000446382 1122 ntBASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 AC138761.1-201ENST00000584393 385 ntBASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
ZC3H4Q9UPT8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZC3H4Q9UPT8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZC3H4Q9UPT8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZC3H4Q9UPT8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ZC3H4Q9UPT8 SIGLEC16-201ENST00000599858 1437 ntBASIC21.83■■□□□ 1.08
ZC3H4Q9UPT8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 BX005266.1-201ENST00000473402 457 ntBASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZC3H4Q9UPT8 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 KRT18P65-201ENST00000439811 1286 ntBASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 HCG4B-203ENST00000450128 991 ntBASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 AC087289.5-201ENST00000586076 3175 ntBASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 GPR89P-201ENST00000407924 1495 ntBASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 IRX1P1-201ENST00000438849 1838 ntBASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.81■■□□□ 1.08
ZC3H4Q9UPT8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 VN2R19P-201ENST00000442399 1052 ntBASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 PMPCAP1-201ENST00000508114 1576 ntBASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
ZC3H4Q9UPT8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms