Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 LINC00265-3P-201ENST00000447588 903 ntBASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 TOB2P1-201ENST00000469761 992 ntBASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 AC091607.1-201ENST00000490318 1060 ntBASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 KRT18P56-201ENST00000507275 550 ntBASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPHK1Q9NYA1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 REXO1L9P-201ENST00000604264 2108 ntBASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 AC068472.1-201ENST00000474589 881 ntBASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 AC009154.2-201ENST00000621177 724 ntBASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPHK1Q9NYA1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 KRT18P65-201ENST00000439811 1286 ntBASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPHK1Q9NYA1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SPHK1Q9NYA1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPHK1Q9NYA1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPHK1Q9NYA1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPHK1Q9NYA1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPHK1Q9NYA1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms