Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 CICP6-201ENST00000457191 2729 ntBASIC17.57■□□□□ 0.4
NDE1Q9NXR1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 UBALD1-205ENST00000590891 2641 ntBASIC17.57■□□□□ 0.4
NDE1Q9NXR1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 AC004911.1-201ENST00000416316 871 ntBASIC17.56■□□□□ 0.4
NDE1Q9NXR1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 AC092437.1-201ENST00000624794 1048 ntBASIC17.56■□□□□ 0.4
NDE1Q9NXR1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 NBPF21P-201ENST00000425093 1451 ntBASIC17.56■□□□□ 0.4
NDE1Q9NXR1 AL162727.3-201ENST00000635661 2787 ntBASIC17.56■□□□□ 0.4
NDE1Q9NXR1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NDE1Q9NXR1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 SOX15-203ENST00000570788 1093 ntBASIC17.55■□□□□ 0.4
NDE1Q9NXR1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms