Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 AL445228.2-201ENST00000605589 952 ntBASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 AL356309.3-201ENST00000624132 1934 ntBASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.64■□□□□ 0.25
SDHAF3Q9NRP4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 LINC01126-201ENST00000623515 1646 ntBASIC16.63■□□□□ 0.25
SDHAF3Q9NRP4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 GPR32P1-201ENST00000601788 811 ntBASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SDHAF3Q9NRP4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms