Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC40Q9H9A6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 AC010203.1-204ENST00000548782 407 ntBASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 AC012306.2-201ENST00000609350 630 ntBASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 AL031432.5-201ENST00000641059 760 ntBASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 AC097493.4-201ENST00000641197 219 ntBASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC40Q9H9A6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 AC113347.1-201ENST00000413321 391 ntBASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 AC140113.3-201ENST00000605663 199 ntBASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 AL023973.1-201ENST00000624619 620 ntBASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRRC40Q9H9A6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC40Q9H9A6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.39■□□□□ 0.54
LRRC40Q9H9A6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.39■□□□□ 0.54
LRRC40Q9H9A6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms