Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.77□□□□□ -0.21
VGLL1Q99990 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.77□□□□□ -0.21
VGLL1Q99990 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.77□□□□□ -0.21
VGLL1Q99990 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VGLL1Q99990 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VGLL1Q99990 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VGLL1Q99990 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VGLL1Q99990 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
VGLL1Q99990 AC124067.4-201ENST00000519691 2379 ntBASIC13.76□□□□□ -0.21
VGLL1Q99990 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.76□□□□□ -0.21
VGLL1Q99990 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VGLL1Q99990 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.76□□□□□ -0.21
VGLL1Q99990 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
VGLL1Q99990 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
VGLL1Q99990 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.76□□□□□ -0.21
VGLL1Q99990 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VGLL1Q99990 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
VGLL1Q99990 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VGLL1Q99990 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.76□□□□□ -0.21
VGLL1Q99990 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.76□□□□□ -0.21
VGLL1Q99990 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.76□□□□□ -0.21
VGLL1Q99990 SLC25A1P4-201ENST00000567977 778 ntBASIC13.76□□□□□ -0.21
VGLL1Q99990 MIR4651-201ENST00000582622 73 ntBASIC13.76□□□□□ -0.21
VGLL1Q99990 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VGLL1Q99990 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.76□□□□□ -0.21
VGLL1Q99990 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.76□□□□□ -0.21
VGLL1Q99990 FAM197Y4-202ENST00000622692 608 ntBASIC13.76□□□□□ -0.21
VGLL1Q99990 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.76□□□□□ -0.21
VGLL1Q99990 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VGLL1Q99990 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
VGLL1Q99990 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VGLL1Q99990 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VGLL1Q99990 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
VGLL1Q99990 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VGLL1Q99990 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.76□□□□□ -0.21
VGLL1Q99990 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.76□□□□□ -0.21
VGLL1Q99990 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
VGLL1Q99990 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.75□□□□□ -0.21
VGLL1Q99990 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.75□□□□□ -0.21
VGLL1Q99990 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.75□□□□□ -0.21
VGLL1Q99990 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.75□□□□□ -0.21
VGLL1Q99990 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.75□□□□□ -0.21
VGLL1Q99990 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.75□□□□□ -0.21
VGLL1Q99990 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.75□□□□□ -0.21
VGLL1Q99990 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
VGLL1Q99990 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VGLL1Q99990 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VGLL1Q99990 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.75□□□□□ -0.21
VGLL1Q99990 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 AC096733.2-201ENST00000609937 1394 ntBASIC13.75□□□□□ -0.21
VGLL1Q99990 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VGLL1Q99990 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.75□□□□□ -0.21
VGLL1Q99990 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VGLL1Q99990 MFAP1P1-201ENST00000442257 1255 ntBASIC13.75□□□□□ -0.21
VGLL1Q99990 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
VGLL1Q99990 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.75□□□□□ -0.21
VGLL1Q99990 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.75□□□□□ -0.21
VGLL1Q99990 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.75□□□□□ -0.21
VGLL1Q99990 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.75□□□□□ -0.21
VGLL1Q99990 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VGLL1Q99990 AC009053.2-201ENST00000563701 2365 ntBASIC13.75□□□□□ -0.21
VGLL1Q99990 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms