Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCD1Q96GM5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 DUSP5P1-201ENST00000441325 1139 ntBASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 NUS1P1-201ENST00000446295 882 ntBASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 AC091607.1-201ENST00000490318 1060 ntBASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 AC012313.10-201ENST00000623509 926 ntBASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCD1Q96GM5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCD1Q96GM5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCD1Q96GM5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.02■□□□□ 0.63
SMARCD1Q96GM5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCD1Q96GM5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCD1Q96GM5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCD1Q96GM5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 IGHV3-47-201ENST00000425060 335 ntBASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 AC112698.1-201ENST00000510299 916 ntBASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 DUTP2-201ENST00000519164 463 ntBASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCD1Q96GM5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19■□□□□ 0.63
SMARCD1Q96GM5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SMARCD1Q96GM5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19■□□□□ 0.63
SMARCD1Q96GM5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SMARCD1Q96GM5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19■□□□□ 0.63
SMARCD1Q96GM5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19■□□□□ 0.63
SMARCD1Q96GM5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19■□□□□ 0.63
SMARCD1Q96GM5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19■□□□□ 0.63
SMARCD1Q96GM5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCD1Q96GM5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms