Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SMARCC1Q92922 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.09■■□□□ 1.29
SMARCC1Q92922 AC108751.1-201ENST00000490852 363 ntBASIC23.09■■□□□ 1.29
SMARCC1Q92922 AC122714.2-201ENST00000502787 707 ntBASIC23.09■■□□□ 1.29
SMARCC1Q92922 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC23.09■■□□□ 1.29
SMARCC1Q92922 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.09■■□□□ 1.29
SMARCC1Q92922 SDCCAG3P1-201ENST00000589292 1150 ntBASIC23.09■■□□□ 1.29
SMARCC1Q92922 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC23.09■■□□□ 1.29
SMARCC1Q92922 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC23.09■■□□□ 1.29
SMARCC1Q92922 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SMARCC1Q92922 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 MED29-202ENST00000594368 1471 ntTSL 2 BASIC23.09■■□□□ 1.29
SMARCC1Q92922 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMARCC1Q92922 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SMARCC1Q92922 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC1Q92922 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC1Q92922 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC1Q92922 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC1Q92922 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC1Q92922 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC1Q92922 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 AC136632.2-201ENST00000512891 861 ntBASIC23.08■■□□□ 1.29
SMARCC1Q92922 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC1Q92922 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC1Q92922 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMARCC1Q92922 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SMARCC1Q92922 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
SMARCC1Q92922 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
SMARCC1Q92922 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
SMARCC1Q92922 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC1Q92922 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
SMARCC1Q92922 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC1Q92922 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SMARCC1Q92922 SIGLEC16-201ENST00000599858 1437 ntBASIC23.08■■□□□ 1.28
SMARCC1Q92922 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
SMARCC1Q92922 AC073130.3-201ENST00000624389 2278 ntBASIC23.07■■□□□ 1.28
SMARCC1Q92922 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 AC096633.1-201ENST00000422446 749 ntBASIC23.07■■□□□ 1.28
SMARCC1Q92922 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 AD001527.2-201ENST00000622994 785 ntBASIC23.07■■□□□ 1.28
SMARCC1Q92922 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 AL049812.1-201ENST00000432563 2267 ntBASIC23.07■■□□□ 1.28
SMARCC1Q92922 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.07■■□□□ 1.28
SMARCC1Q92922 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMARCC1Q92922 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 AC007952.6-201ENST00000573168 2673 ntBASIC23.06■■□□□ 1.28
SMARCC1Q92922 AC003957.1-201ENST00000625108 2673 ntBASIC23.06■■□□□ 1.28
SMARCC1Q92922 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC1Q92922 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC1Q92922 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC1Q92922 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC1Q92922 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC1Q92922 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 AC005829.1-201ENST00000570002 483 ntBASIC23.06■■□□□ 1.28
SMARCC1Q92922 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC1Q92922 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMARCC1Q92922 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC23.06■■□□□ 1.28
SMARCC1Q92922 KRT18P28-201ENST00000453838 1332 ntBASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms