Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.14■□□□□ 0.49
HMGB4Q8WW32 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HMGB4Q8WW32 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 AC005082.1-201ENST00000413042 2259 ntBASIC18.13■□□□□ 0.49
HMGB4Q8WW32 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 AP005117.1-201ENST00000584346 1413 ntBASIC18.13■□□□□ 0.49
HMGB4Q8WW32 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HMGB4Q8WW32 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 MIR1233-2-201ENST00000408138 82 ntBASIC18.12■□□□□ 0.49
HMGB4Q8WW32 MIR1233-1-201ENST00000408722 82 ntBASIC18.12■□□□□ 0.49
HMGB4Q8WW32 ABCD1P5-201ENST00000445663 754 ntBASIC18.12■□□□□ 0.49
HMGB4Q8WW32 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 SART3-203ENST00000546611 1184 ntBASIC18.12■□□□□ 0.49
HMGB4Q8WW32 AC021087.4-201ENST00000563761 564 ntBASIC18.12■□□□□ 0.49
HMGB4Q8WW32 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGB4Q8WW32 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 RPS2P1-201ENST00000434010 821 ntBASIC18.11■□□□□ 0.49
HMGB4Q8WW32 KRT18P65-201ENST00000439811 1286 ntBASIC18.11■□□□□ 0.49
HMGB4Q8WW32 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGB4Q8WW32 AC138932.1-201ENST00000534164 6830 ntBASIC18.1■□□□□ 0.49
HMGB4Q8WW32 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGB4Q8WW32 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms