Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 GPR32P1-201ENST00000601788 811 ntBASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC148Q8NFR7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 AC005332.1-201ENST00000577698 1310 ntBASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 FAM86EP-206ENST00000510506 987 ntBASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 LINC00167-201ENST00000530583 1419 ntBASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC148Q8NFR7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 ARMC10P1-201ENST00000313754 855 ntBASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 AC005332.3-201ENST00000589904 676 ntBASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 AL390719.2-201ENST00000606993 987 ntBASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 AC004263.2-201ENST00000617183 678 ntBASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC148Q8NFR7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms