Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 AL008721.1-201ENST00000609964 604 ntBASIC15.2■□□□□ 0.02
CSMD2Q7Z408 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.2■□□□□ 0.02
CSMD2Q7Z408 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 SIGLEC16-201ENST00000599858 1437 ntBASIC15.19■□□□□ 0.02
CSMD2Q7Z408 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 AL024508.2-201ENST00000607749 1894 ntBASIC15.19■□□□□ 0.02
CSMD2Q7Z408 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD2Q7Z408 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 MRPL20P1-201ENST00000400819 433 ntBASIC15.18■□□□□ 0.02
CSMD2Q7Z408 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 IGLL3P-201ENST00000412472 434 ntBASIC15.18■□□□□ 0.02
CSMD2Q7Z408 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 AC093214.1-201ENST00000511688 1107 ntBASIC15.18■□□□□ 0.02
CSMD2Q7Z408 KRT18P41-201ENST00000518924 1277 ntBASIC15.18■□□□□ 0.02
CSMD2Q7Z408 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 AL513210.1-201ENST00000629608 234 ntBASIC15.18■□□□□ 0.02
CSMD2Q7Z408 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD2Q7Z408 AC069262.1-201ENST00000539058 672 ntBASIC15.18■□□□□ 0.02
CSMD2Q7Z408 LINC00628-201ENST00000628516 1289 ntBASIC15.18■□□□□ 0.02
CSMD2Q7Z408 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.17■□□□□ 0.02
CSMD2Q7Z408 GABARAPL3-202ENST00000624044 1851 ntBASIC15.17■□□□□ 0.02
CSMD2Q7Z408 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms