Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL024508.2-201ENST00000607749 1894 ntBASIC15.62■□□□□ 0.09
LRRK2Q5S007 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 AC007375.3-201ENST00000600936 2314 ntBASIC15.62■□□□□ 0.09
LRRK2Q5S007 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.62■□□□□ 0.09
LRRK2Q5S007 NCF1C-201ENST00000438382 1427 ntBASIC15.62■□□□□ 0.09
LRRK2Q5S007 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 AC010336.2-201ENST00000564226 506 ntBASIC15.62■□□□□ 0.09
LRRK2Q5S007 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.62■□□□□ 0.09
LRRK2Q5S007 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRK2Q5S007 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 KRT8P47-201ENST00000604727 1398 ntBASIC15.62■□□□□ 0.09
LRRK2Q5S007 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRK2Q5S007 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 LINC00565-201ENST00000562710 2331 ntBASIC15.61■□□□□ 0.09
LRRK2Q5S007 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 RHOQP3-201ENST00000437982 621 ntBASIC15.61■□□□□ 0.09
LRRK2Q5S007 AL512356.2-201ENST00000546955 174 ntBASIC15.61■□□□□ 0.09
LRRK2Q5S007 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 MIR6799-201ENST00000620297 69 ntBASIC15.61■□□□□ 0.09
LRRK2Q5S007 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRK2Q5S007 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRK2Q5S007 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 KRT18P65-201ENST00000439811 1286 ntBASIC15.6■□□□□ 0.09
LRRK2Q5S007 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRK2Q5S007 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRK2Q5S007 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRK2Q5S007 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRK2Q5S007 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms