Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.63□□□□□ -0.07
CX3CL1P78423 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.63□□□□□ -0.07
CX3CL1P78423 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CX3CL1P78423 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 AC005521.1-201ENST00000393351 872 ntBASIC14.63□□□□□ -0.07
CX3CL1P78423 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.63□□□□□ -0.07
CX3CL1P78423 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.63□□□□□ -0.07
CX3CL1P78423 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.63□□□□□ -0.07
CX3CL1P78423 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.63□□□□□ -0.07
CX3CL1P78423 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.63□□□□□ -0.07
CX3CL1P78423 AC009065.1-201ENST00000564055 1225 ntBASIC14.63□□□□□ -0.07
CX3CL1P78423 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.63□□□□□ -0.07
CX3CL1P78423 AC140113.3-201ENST00000605663 199 ntBASIC14.63□□□□□ -0.07
CX3CL1P78423 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.63□□□□□ -0.07
CX3CL1P78423 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CX3CL1P78423 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CX3CL1P78423 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.63□□□□□ -0.07
CX3CL1P78423 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CX3CL1P78423 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.63□□□□□ -0.07
CX3CL1P78423 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CX3CL1P78423 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.62□□□□□ -0.07
CX3CL1P78423 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.62□□□□□ -0.07
CX3CL1P78423 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CX3CL1P78423 SEC1P-202ENST00000473944 940 ntBASIC14.62□□□□□ -0.07
CX3CL1P78423 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.62□□□□□ -0.07
CX3CL1P78423 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CX3CL1P78423 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.62□□□□□ -0.07
CX3CL1P78423 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.62□□□□□ -0.07
CX3CL1P78423 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.62□□□□□ -0.07
CX3CL1P78423 MIR3180-4-201ENST00000582223 153 ntBASIC14.62□□□□□ -0.07
CX3CL1P78423 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.62□□□□□ -0.07
CX3CL1P78423 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.62□□□□□ -0.07
CX3CL1P78423 AL031432.5-201ENST00000641059 760 ntBASIC14.62□□□□□ -0.07
CX3CL1P78423 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CX3CL1P78423 AC099343.3-201ENST00000605834 2503 ntBASIC14.62□□□□□ -0.07
CX3CL1P78423 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.62□□□□□ -0.07
CX3CL1P78423 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.62□□□□□ -0.07
CX3CL1P78423 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CX3CL1P78423 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.62□□□□□ -0.07
CX3CL1P78423 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.61□□□□□ -0.07
CX3CL1P78423 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.61□□□□□ -0.07
CX3CL1P78423 ABALON-201ENST00000629058 1903 ntBASIC14.61□□□□□ -0.07
CX3CL1P78423 AC073508.3-201ENST00000619697 1419 ntBASIC14.61□□□□□ -0.07
CX3CL1P78423 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CX3CL1P78423 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CX3CL1P78423 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.61□□□□□ -0.07
CX3CL1P78423 BX664615.1-201ENST00000443558 458 ntBASIC14.61□□□□□ -0.07
CX3CL1P78423 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CX3CL1P78423 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.61□□□□□ -0.07
CX3CL1P78423 COX11P1-201ENST00000489116 835 ntBASIC14.61□□□□□ -0.07
CX3CL1P78423 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.61□□□□□ -0.07
CX3CL1P78423 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CX3CL1P78423 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CX3CL1P78423 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.61□□□□□ -0.07
CX3CL1P78423 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.61□□□□□ -0.07
CX3CL1P78423 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CL1P78423 AC010240.3-201ENST00000607688 395 ntBASIC14.61□□□□□ -0.07
CX3CL1P78423 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms