Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAE1P78406 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAE1P78406 SPDYE15P-201ENST00000424157 909 ntBASIC17.2■□□□□ 0.34
RAE1P78406 ATP5G1P1-201ENST00000448724 379 ntBASIC17.2■□□□□ 0.34
RAE1P78406 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.2■□□□□ 0.34
RAE1P78406 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAE1P78406 AC139887.4-201ENST00000607877 719 ntBASIC17.2■□□□□ 0.34
RAE1P78406 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.2■□□□□ 0.34
RAE1P78406 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RAE1P78406 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAE1P78406 AC005363.2-201ENST00000618631 242 ntBASIC17.2■□□□□ 0.34
RAE1P78406 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAE1P78406 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
RAE1P78406 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAE1P78406 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAE1P78406 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.2■□□□□ 0.34
RAE1P78406 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAE1P78406 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RAE1P78406 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.19■□□□□ 0.34
RAE1P78406 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.19■□□□□ 0.34
RAE1P78406 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.19■□□□□ 0.34
RAE1P78406 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.19■□□□□ 0.34
RAE1P78406 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 AL137013.1-201ENST00000432946 1228 ntBASIC17.19■□□□□ 0.34
RAE1P78406 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.19■□□□□ 0.34
RAE1P78406 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 AC008687.5-201ENST00000593746 558 ntBASIC17.19■□□□□ 0.34
RAE1P78406 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.19■□□□□ 0.34
RAE1P78406 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.19■□□□□ 0.34
RAE1P78406 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAE1P78406 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAE1P78406 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.19■□□□□ 0.34
RAE1P78406 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAE1P78406 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.19■□□□□ 0.34
RAE1P78406 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RAE1P78406 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RAE1P78406 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.18■□□□□ 0.34
RAE1P78406 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.18■□□□□ 0.34
RAE1P78406 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.18■□□□□ 0.34
RAE1P78406 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.18■□□□□ 0.34
RAE1P78406 AC005521.1-201ENST00000393351 872 ntBASIC17.18■□□□□ 0.34
RAE1P78406 AC117947.1-201ENST00000427448 529 ntBASIC17.18■□□□□ 0.34
RAE1P78406 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.18■□□□□ 0.34
RAE1P78406 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.18■□□□□ 0.34
RAE1P78406 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAE1P78406 YBX1P2-201ENST00000489612 999 ntBASIC17.18■□□□□ 0.34
RAE1P78406 AC113404.2-201ENST00000507884 177 ntBASIC17.18■□□□□ 0.34
RAE1P78406 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.18■□□□□ 0.34
RAE1P78406 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.18■□□□□ 0.34
RAE1P78406 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.18■□□□□ 0.34
RAE1P78406 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RAE1P78406 AC024563.2-201ENST00000603282 481 ntBASIC17.18■□□□□ 0.34
RAE1P78406 AL031432.5-201ENST00000641059 760 ntBASIC17.18■□□□□ 0.34
RAE1P78406 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.18■□□□□ 0.34
RAE1P78406 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAE1P78406 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.18■□□□□ 0.34
RAE1P78406 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAE1P78406 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAE1P78406 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.17■□□□□ 0.34
RAE1P78406 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAE1P78406 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAE1P78406 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.17■□□□□ 0.34
RAE1P78406 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAE1P78406 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAE1P78406 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAE1P78406 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAE1P78406 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.17■□□□□ 0.34
RAE1P78406 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAE1P78406 AC211429.1-201ENST00000415277 523 ntBASIC17.17■□□□□ 0.34
RAE1P78406 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.17■□□□□ 0.34
RAE1P78406 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.17■□□□□ 0.34
RAE1P78406 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAE1P78406 BX664615.1-201ENST00000443558 458 ntBASIC17.17■□□□□ 0.34
RAE1P78406 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
RAE1P78406 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms