Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 AL391807.1-203ENST00000604392 2365 ntBASIC15.84■□□□□ 0.13
HIST1H3AP68431 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 AC005521.1-201ENST00000393351 872 ntBASIC15.84■□□□□ 0.13
HIST1H3AP68431 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 AC117947.1-201ENST00000427448 529 ntBASIC15.84■□□□□ 0.13
HIST1H3AP68431 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.84■□□□□ 0.13
HIST1H3AP68431 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.84■□□□□ 0.13
HIST1H3AP68431 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H3AP68431 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
HIST1H3AP68431 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H3AP68431 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H3AP68431 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H3AP68431 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H3AP68431 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 SPDYE15P-201ENST00000424157 909 ntBASIC15.83■□□□□ 0.12
HIST1H3AP68431 HLA-F-220ENST00000434407 884 ntBASIC15.83■□□□□ 0.12
HIST1H3AP68431 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 AC024563.2-201ENST00000603282 481 ntBASIC15.83■□□□□ 0.12
HIST1H3AP68431 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.83■□□□□ 0.12
HIST1H3AP68431 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H3AP68431 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 GNAS-203ENST00000306120 1878 ntBASIC15.82■□□□□ 0.12
HIST1H3AP68431 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.82■□□□□ 0.12
HIST1H3AP68431 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H3AP68431 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms