Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATP1B3P54709 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP1B3P54709 TNRC18P3-201ENST00000441896 2691 ntBASIC15.75■□□□□ 0.11
ATP1B3P54709 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP1B3P54709 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
ATP1B3P54709 KRT8P7-201ENST00000533003 1432 ntBASIC15.75■□□□□ 0.11
ATP1B3P54709 AC134043.2-201ENST00000624206 2238 ntBASIC15.75■□□□□ 0.11
ATP1B3P54709 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP1B3P54709 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ATP1B3P54709 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP1B3P54709 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATP1B3P54709 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP1B3P54709 AC036111.1-201ENST00000533973 1582 ntBASIC15.75■□□□□ 0.11
ATP1B3P54709 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP1B3P54709 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP1B3P54709 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.74■□□□□ 0.11
ATP1B3P54709 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP1B3P54709 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP1B3P54709 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP1B3P54709 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATP1B3P54709 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATP1B3P54709 AC138028.4-201ENST00000564984 1845 ntBASIC15.74■□□□□ 0.11
ATP1B3P54709 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATP1B3P54709 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.74■□□□□ 0.11
ATP1B3P54709 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.74■□□□□ 0.11
ATP1B3P54709 CCR12P-201ENST00000446203 998 ntBASIC15.74■□□□□ 0.11
ATP1B3P54709 MIR4785-201ENST00000585005 73 ntBASIC15.74■□□□□ 0.11
ATP1B3P54709 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.74■□□□□ 0.11
ATP1B3P54709 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP1B3P54709 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ATP1B3P54709 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATP1B3P54709 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATP1B3P54709 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP1B3P54709 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP1B3P54709 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 AC124067.4-201ENST00000519691 2379 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 AL163051.1-201ENST00000569214 1512 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.73■□□□□ 0.11
ATP1B3P54709 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.73■□□□□ 0.11
ATP1B3P54709 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
ATP1B3P54709 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ATP1B3P54709 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 AC009102.3-201ENST00000623118 1491 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP1B3P54709 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 SIRPAP1-201ENST00000448467 1770 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP1B3P54709 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.73■□□□□ 0.11
ATP1B3P54709 MIR149-201ENST00000384879 89 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 KRT18P23-201ENST00000435622 1283 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.73■□□□□ 0.11
ATP1B3P54709 RBM17P1-201ENST00000453646 1190 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 AP003041.3-201ENST00000527151 707 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.73■□□□□ 0.11
ATP1B3P54709 AC009065.1-201ENST00000564055 1225 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 AL353719.1-201ENST00000566847 864 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 MIR4674-201ENST00000582457 87 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 HOXB1-202ENST00000577092 1414 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 GNAS-203ENST00000306120 1878 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP1B3P54709 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.73■□□□□ 0.11
ATP1B3P54709 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP1B3P54709 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP1B3P54709 REXO1L9P-201ENST00000604264 2108 ntBASIC15.73■□□□□ 0.11
ATP1B3P54709 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms