Protein–RNA interactions for Protein: P28715

ERCC5, DNA repair protein complementing XP-G cells, humanhuman

Predicted RBP Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC5P28715 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ERCC5P28715 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.06■□□□□ 0.8
ERCC5P28715 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.06■□□□□ 0.8
ERCC5P28715 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.06■□□□□ 0.8
ERCC5P28715 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ERCC5P28715 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
ERCC5P28715 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ERCC5P28715 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
ERCC5P28715 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.06■□□□□ 0.8
ERCC5P28715 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ERCC5P28715 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC5P28715 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.05■□□□□ 0.8
ERCC5P28715 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC5P28715 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC5P28715 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC5P28715 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ERCC5P28715 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ERCC5P28715 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.05■□□□□ 0.8
ERCC5P28715 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.05■□□□□ 0.8
ERCC5P28715 MIR4785-201ENST00000585005 73 ntBASIC20.05■□□□□ 0.8
ERCC5P28715 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC5P28715 AP000525.1-201ENST00000608286 694 ntBASIC20.05■□□□□ 0.8
ERCC5P28715 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC5P28715 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ERCC5P28715 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ERCC5P28715 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC5P28715 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC5P28715 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC5P28715 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC5P28715 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.05■□□□□ 0.8
ERCC5P28715 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ERCC5P28715 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC5P28715 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 AC141586.5-201ENST00000624546 2050 ntBASIC20.04■□□□□ 0.8
ERCC5P28715 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.04■□□□□ 0.8
ERCC5P28715 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC5P28715 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC5P28715 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ERCC5P28715 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 TSPY14P-201ENST00000303979 915 ntBASIC20.04■□□□□ 0.8
ERCC5P28715 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.04■□□□□ 0.8
ERCC5P28715 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC5P28715 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ERCC5P28715 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC5P28715 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC5P28715 C2orf69P3-201ENST00000565542 1120 ntBASIC20.04■□□□□ 0.8
ERCC5P28715 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.04■□□□□ 0.8
ERCC5P28715 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ERCC5P28715 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.04■□□□□ 0.8
ERCC5P28715 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ERCC5P28715 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
ERCC5P28715 FZD10-202ENST00000539839 3282 ntBASIC20.04■□□□□ 0.8
ERCC5P28715 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.04■□□□□ 0.8
ERCC5P28715 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERCC5P28715 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.03■□□□□ 0.8
ERCC5P28715 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
ERCC5P28715 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.03■□□□□ 0.8
ERCC5P28715 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.03■□□□□ 0.8
ERCC5P28715 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC5P28715 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ERCC5P28715 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ERCC5P28715 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ERCC5P28715 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC5P28715 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC5P28715 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERCC5P28715 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms