Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB4AP20338 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB4AP20338 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RAB4AP20338 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 AC010536.3-201ENST00000620306 533 ntBASIC13.92□□□□□ -0.18
RAB4AP20338 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RAB4AP20338 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB4AP20338 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RAB4AP20338 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.92□□□□□ -0.18
RAB4AP20338 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB4AP20338 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RAB4AP20338 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB4AP20338 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.91□□□□□ -0.18
RAB4AP20338 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB4AP20338 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RAB4AP20338 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAB4AP20338 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAB4AP20338 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 DOC2GP-204ENST00000639052 2548 ntBASIC13.91□□□□□ -0.18
RAB4AP20338 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB4AP20338 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB4AP20338 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.91□□□□□ -0.18
RAB4AP20338 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.91□□□□□ -0.18
RAB4AP20338 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RAB4AP20338 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RAB4AP20338 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB4AP20338 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB4AP20338 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
RAB4AP20338 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RAB4AP20338 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
RAB4AP20338 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 AC104417.2-201ENST00000562989 1793 ntBASIC13.91□□□□□ -0.18
RAB4AP20338 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RAB4AP20338 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB4AP20338 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RAB4AP20338 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB4AP20338 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
RAB4AP20338 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 AC067930.6-201ENST00000623257 4947 ntBASIC13.9□□□□□ -0.18
RAB4AP20338 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 PCDHB17P-201ENST00000539533 2393 ntBASIC13.9□□□□□ -0.18
RAB4AP20338 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB4AP20338 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RAB4AP20338 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB4AP20338 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB4AP20338 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB4AP20338 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB4AP20338 AC007322.4-201ENST00000509611 723 ntBASIC13.9□□□□□ -0.18
RAB4AP20338 RARRES2P4-201ENST00000514074 484 ntBASIC13.9□□□□□ -0.18
RAB4AP20338 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB4AP20338 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB4AP20338 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB4AP20338 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB4AP20338 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms