Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NCK1P16333 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.16■□□□□ 0.34
NCK1P16333 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 MCCD1P1-208ENST00000445732 328 ntBASIC17.16■□□□□ 0.34
NCK1P16333 AC011506.1-201ENST00000474329 610 ntBASIC17.16■□□□□ 0.34
NCK1P16333 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.16■□□□□ 0.34
NCK1P16333 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.16■□□□□ 0.34
NCK1P16333 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.16■□□□□ 0.34
NCK1P16333 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.16■□□□□ 0.34
NCK1P16333 AC130371.2-201ENST00000619443 611 ntBASIC17.16■□□□□ 0.34
NCK1P16333 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.16■□□□□ 0.34
NCK1P16333 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 AC011676.5-201ENST00000624864 2660 ntBASIC17.16■□□□□ 0.34
NCK1P16333 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NCK1P16333 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NCK1P16333 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
NCK1P16333 NKILA-202ENST00000614771 2598 ntBASIC17.16■□□□□ 0.34
NCK1P16333 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 KRT18P55-202ENST00000578578 1546 ntBASIC17.16■□□□□ 0.34
NCK1P16333 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCK1P16333 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NCK1P16333 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 KRT16P1-201ENST00000399124 1418 ntBASIC17.15■□□□□ 0.34
NCK1P16333 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
NCK1P16333 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.15■□□□□ 0.34
NCK1P16333 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NCK1P16333 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NCK1P16333 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.15■□□□□ 0.34
NCK1P16333 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
NCK1P16333 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NCK1P16333 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.15■□□□□ 0.34
NCK1P16333 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NCK1P16333 AL355312.1-201ENST00000407115 2176 ntBASIC17.15■□□□□ 0.34
NCK1P16333 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCK1P16333 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.15■□□□□ 0.34
NCK1P16333 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NCK1P16333 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NCK1P16333 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
NCK1P16333 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.14■□□□□ 0.34
NCK1P16333 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NCK1P16333 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.14■□□□□ 0.33
NCK1P16333 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.14■□□□□ 0.33
NCK1P16333 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 AL355802.2-201ENST00000402069 882 ntBASIC17.14■□□□□ 0.33
NCK1P16333 AC133681.1-201ENST00000465482 601 ntBASIC17.14■□□□□ 0.33
NCK1P16333 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.14■□□□□ 0.33
NCK1P16333 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NCK1P16333 AL353708.3-201ENST00000610272 989 ntBASIC17.14■□□□□ 0.33
NCK1P16333 AL031985.4-201ENST00000642138 673 ntBASIC17.14■□□□□ 0.33
NCK1P16333 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.14■□□□□ 0.33
NCK1P16333 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.14■□□□□ 0.33
NCK1P16333 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.14■□□□□ 0.33
NCK1P16333 AC093010.1-201ENST00000473625 1624 ntBASIC17.14■□□□□ 0.33
NCK1P16333 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.14■□□□□ 0.33
NCK1P16333 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.14■□□□□ 0.33
NCK1P16333 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCK1P16333 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.13■□□□□ 0.33
NCK1P16333 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCK1P16333 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 LINC00602-201ENST00000629776 2065 ntBASIC17.13■□□□□ 0.33
NCK1P16333 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCK1P16333 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms