Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.73■■□□□ 1.07
COL1A1P02452 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.73■■□□□ 1.07
COL1A1P02452 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A1P02452 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.73■■□□□ 1.07
COL1A1P02452 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.73■■□□□ 1.07
COL1A1P02452 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.73■■□□□ 1.07
COL1A1P02452 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.73■■□□□ 1.07
COL1A1P02452 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.73■■□□□ 1.07
COL1A1P02452 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A1P02452 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
COL1A1P02452 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
COL1A1P02452 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A1P02452 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A1P02452 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A1P02452 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
COL1A1P02452 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL1A1P02452 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.73■■□□□ 1.07
COL1A1P02452 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.73■■□□□ 1.07
COL1A1P02452 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
COL1A1P02452 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.72■■□□□ 1.07
COL1A1P02452 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.72■■□□□ 1.07
COL1A1P02452 POLD2P1-201ENST00000511220 997 ntBASIC21.72■■□□□ 1.07
COL1A1P02452 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.72■■□□□ 1.07
COL1A1P02452 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.72■■□□□ 1.07
COL1A1P02452 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.72■■□□□ 1.07
COL1A1P02452 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.72■■□□□ 1.07
COL1A1P02452 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COL1A1P02452 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL1A1P02452 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
COL1A1P02452 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.72■■□□□ 1.07
COL1A1P02452 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL1A1P02452 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.71■■□□□ 1.07
COL1A1P02452 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 AC093677.2-201ENST00000600169 1863 ntBASIC21.71■■□□□ 1.07
COL1A1P02452 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.71■■□□□ 1.07
COL1A1P02452 PMS2P7-201ENST00000506558 1336 ntBASIC21.71■■□□□ 1.07
COL1A1P02452 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL1A1P02452 AL096828.2-201ENST00000567259 1965 ntBASIC21.71■■□□□ 1.07
COL1A1P02452 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
COL1A1P02452 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL1A1P02452 FAM220CP-201ENST00000395253 831 ntBASIC21.71■■□□□ 1.07
COL1A1P02452 HNRNPDP1-201ENST00000439535 754 ntBASIC21.71■■□□□ 1.07
COL1A1P02452 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
COL1A1P02452 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.71■■□□□ 1.07
COL1A1P02452 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.71■■□□□ 1.07
COL1A1P02452 SART3-203ENST00000546611 1184 ntBASIC21.71■■□□□ 1.07
COL1A1P02452 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
COL1A1P02452 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.71■■□□□ 1.07
COL1A1P02452 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.71■■□□□ 1.07
COL1A1P02452 FAM215A-202ENST00000632077 792 ntBASIC21.71■■□□□ 1.07
COL1A1P02452 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.7■■□□□ 1.06
COL1A1P02452 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
COL1A1P02452 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.7■■□□□ 1.06
COL1A1P02452 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A1P02452 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A1P02452 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A1P02452 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A1P02452 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A1P02452 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
COL1A1P02452 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A1P02452 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A1P02452 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A1P02452 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COL1A1P02452 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL1A1P02452 AC145285.3-201ENST00000564603 959 ntBASIC21.7■■□□□ 1.06
COL1A1P02452 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
COL1A1P02452 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
COL1A1P02452 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.69■■□□□ 1.06
COL1A1P02452 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.69■■□□□ 1.06
COL1A1P02452 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
COL1A1P02452 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms