Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 PCDHB18P-201ENST00000524813 2368 ntBASIC20.08■□□□□ 0.8
CLSTN1O94985 AL499627.1-201ENST00000569373 2188 ntBASIC20.08■□□□□ 0.8
CLSTN1O94985 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.08■□□□□ 0.8
CLSTN1O94985 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLSTN1O94985 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.08■□□□□ 0.8
CLSTN1O94985 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLSTN1O94985 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLSTN1O94985 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLSTN1O94985 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
CLSTN1O94985 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.07■□□□□ 0.8
CLSTN1O94985 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLSTN1O94985 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.07■□□□□ 0.8
CLSTN1O94985 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.07■□□□□ 0.8
CLSTN1O94985 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 TERF1P1-201ENST00000311003 1181 ntBASIC20.07■□□□□ 0.8
CLSTN1O94985 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.07■□□□□ 0.8
CLSTN1O94985 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.07■□□□□ 0.8
CLSTN1O94985 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.07■□□□□ 0.8
CLSTN1O94985 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLSTN1O94985 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.06■□□□□ 0.8
CLSTN1O94985 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.06■□□□□ 0.8
CLSTN1O94985 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CLSTN1O94985 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.06■□□□□ 0.8
CLSTN1O94985 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.06■□□□□ 0.8
CLSTN1O94985 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.06■□□□□ 0.8
CLSTN1O94985 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLSTN1O94985 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLSTN1O94985 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.06■□□□□ 0.8
CLSTN1O94985 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLSTN1O94985 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.06■□□□□ 0.8
CLSTN1O94985 AC034236.2-201ENST00000606662 1610 ntBASIC20.05■□□□□ 0.8
CLSTN1O94985 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.05■□□□□ 0.8
CLSTN1O94985 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.05■□□□□ 0.8
CLSTN1O94985 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.05■□□□□ 0.8
CLSTN1O94985 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.05■□□□□ 0.8
CLSTN1O94985 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.05■□□□□ 0.8
CLSTN1O94985 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.05■□□□□ 0.8
CLSTN1O94985 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.05■□□□□ 0.8
CLSTN1O94985 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.05■□□□□ 0.8
CLSTN1O94985 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.05■□□□□ 0.8
CLSTN1O94985 AC140113.3-201ENST00000605663 199 ntBASIC20.05■□□□□ 0.8
CLSTN1O94985 AL023973.1-201ENST00000624619 620 ntBASIC20.05■□□□□ 0.8
CLSTN1O94985 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CLSTN1O94985 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLSTN1O94985 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.04■□□□□ 0.8
CLSTN1O94985 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLSTN1O94985 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 AP000523.1-201ENST00000398242 1049 ntBASIC20.04■□□□□ 0.8
CLSTN1O94985 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.04■□□□□ 0.8
CLSTN1O94985 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms