Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.59□□□□□ -0.23
SNAI2O43623 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNAI2O43623 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNAI2O43623 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.59□□□□□ -0.23
SNAI2O43623 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SNAI2O43623 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.59□□□□□ -0.23
SNAI2O43623 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNAI2O43623 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.59□□□□□ -0.23
SNAI2O43623 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNAI2O43623 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.59□□□□□ -0.23
SNAI2O43623 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.59□□□□□ -0.23
SNAI2O43623 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
SNAI2O43623 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.59□□□□□ -0.23
SNAI2O43623 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.59□□□□□ -0.23
SNAI2O43623 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.59□□□□□ -0.23
SNAI2O43623 HYMAI-201ENST00000635591 3347 ntBASIC13.59□□□□□ -0.23
SNAI2O43623 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNAI2O43623 AD000864.1-201ENST00000624076 2295 ntBASIC13.59□□□□□ -0.23
SNAI2O43623 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SNAI2O43623 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNAI2O43623 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SNAI2O43623 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNAI2O43623 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.58□□□□□ -0.23
SNAI2O43623 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
SNAI2O43623 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SNAI2O43623 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNAI2O43623 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.58□□□□□ -0.24
SNAI2O43623 TSPY26P-202ENST00000565928 3884 ntBASIC13.58□□□□□ -0.24
SNAI2O43623 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SNAI2O43623 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.58□□□□□ -0.24
SNAI2O43623 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.58□□□□□ -0.24
SNAI2O43623 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.58□□□□□ -0.24
SNAI2O43623 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
SNAI2O43623 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.58□□□□□ -0.24
SNAI2O43623 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SNAI2O43623 POM121L13P-201ENST00000422362 380 ntBASIC13.58□□□□□ -0.24
SNAI2O43623 UNC93B4-201ENST00000505679 747 ntBASIC13.58□□□□□ -0.24
SNAI2O43623 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.58□□□□□ -0.24
SNAI2O43623 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.58□□□□□ -0.24
SNAI2O43623 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
SNAI2O43623 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.58□□□□□ -0.24
SNAI2O43623 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 AC012317.2-201ENST00000623305 2251 ntBASIC13.58□□□□□ -0.24
SNAI2O43623 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SNAI2O43623 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SNAI2O43623 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.58□□□□□ -0.24
SNAI2O43623 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.58□□□□□ -0.24
SNAI2O43623 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNAI2O43623 MYLKP1-201ENST00000509077 1580 ntBASIC13.58□□□□□ -0.24
SNAI2O43623 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
SNAI2O43623 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.58□□□□□ -0.24
SNAI2O43623 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
SNAI2O43623 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNAI2O43623 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.57□□□□□ -0.24
SNAI2O43623 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNAI2O43623 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.57□□□□□ -0.24
SNAI2O43623 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.57□□□□□ -0.24
SNAI2O43623 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNAI2O43623 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNAI2O43623 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNAI2O43623 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
SNAI2O43623 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.57□□□□□ -0.24
SNAI2O43623 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNAI2O43623 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.57□□□□□ -0.24
SNAI2O43623 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SNAI2O43623 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms