Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 AL513477.1-201ENST00000602865 2407 ntBASIC12.91□□□□□ -0.34
LINC01549A6NIU2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01549A6NIU2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 NKILA-202ENST00000614771 2598 ntBASIC12.9□□□□□ -0.34
LINC01549A6NIU2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 AC092437.1-201ENST00000624794 1048 ntBASIC12.9□□□□□ -0.34
LINC01549A6NIU2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 AC011676.5-201ENST00000624864 2660 ntBASIC12.9□□□□□ -0.34
LINC01549A6NIU2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC01549A6NIU2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01549A6NIU2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01549A6NIU2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01549A6NIU2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01549A6NIU2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01549A6NIU2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01549A6NIU2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms