Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 HOXB1-202ENST00000577092 1414 ntBASIC16.22■□□□□ 0.19
TVP23AA6NH52 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 MIR718-201ENST00000390190 70 ntBASIC16.22■□□□□ 0.19
TVP23AA6NH52 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 MIR4785-201ENST00000585005 73 ntBASIC16.22■□□□□ 0.19
TVP23AA6NH52 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.22■□□□□ 0.19
TVP23AA6NH52 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TVP23AA6NH52 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 AC092338.2-201ENST00000568827 1415 ntBASIC16.21■□□□□ 0.19
TVP23AA6NH52 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 SLC25A6P5-201ENST00000435663 894 ntBASIC16.21■□□□□ 0.19
TVP23AA6NH52 CCR12P-201ENST00000446203 998 ntBASIC16.21■□□□□ 0.19
TVP23AA6NH52 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 FITM1-202ENST00000559294 800 ntBASIC16.21■□□□□ 0.19
TVP23AA6NH52 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TVP23AA6NH52 AC012317.2-201ENST00000623305 2251 ntBASIC16.21■□□□□ 0.19
TVP23AA6NH52 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TVP23AA6NH52 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TVP23AA6NH52 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.21■□□□□ 0.18
TVP23AA6NH52 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.21■□□□□ 0.18
TVP23AA6NH52 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TVP23AA6NH52 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TVP23AA6NH52 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TVP23AA6NH52 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.2■□□□□ 0.18
TVP23AA6NH52 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TVP23AA6NH52 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TVP23AA6NH52 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
TVP23AA6NH52 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TVP23AA6NH52 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TVP23AA6NH52 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.2■□□□□ 0.18
TVP23AA6NH52 LINC01126-201ENST00000623515 1646 ntBASIC16.2■□□□□ 0.18
TVP23AA6NH52 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TVP23AA6NH52 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TVP23AA6NH52 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TVP23AA6NH52 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TVP23AA6NH52 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.2■□□□□ 0.18
TVP23AA6NH52 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms