Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.83■□□□□ 0.12
SHISA3A0PJX4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 UNC93B5-201ENST00000530315 699 ntBASIC15.82■□□□□ 0.12
SHISA3A0PJX4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.82■□□□□ 0.12
SHISA3A0PJX4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 MIR149-201ENST00000384879 89 ntBASIC15.81■□□□□ 0.12
SHISA3A0PJX4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 RPS2P4-201ENST00000476944 856 ntBASIC15.81■□□□□ 0.12
SHISA3A0PJX4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 LINC00304-203ENST00000565008 1864 ntBASIC15.81■□□□□ 0.12
SHISA3A0PJX4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 AC069544.1-201ENST00000609399 999 ntBASIC15.81■□□□□ 0.12
SHISA3A0PJX4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.81■□□□□ 0.12
SHISA3A0PJX4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 PCDHA14-201ENST00000506751 2298 ntBASIC15.8■□□□□ 0.12
SHISA3A0PJX4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 AC011298.2-201ENST00000617989 482 ntBASIC15.8■□□□□ 0.12
SHISA3A0PJX4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 AL023875.1-201ENST00000640777 796 ntBASIC15.8■□□□□ 0.12
SHISA3A0PJX4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHISA3A0PJX4 AC090340.1-201ENST00000620778 4980 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms