Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 AC009065.1-201ENST00000564055 1225 ntBASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV27A0A087WT01 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV27A0A087WT01 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.46■□□□□ 0.22
TRAV27A0A087WT01 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV27A0A087WT01 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
TRAV27A0A087WT01 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TRAV27A0A087WT01 AL024508.2-201ENST00000607749 1894 ntBASIC16.46■□□□□ 0.22
TRAV27A0A087WT01 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV27A0A087WT01 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 TSPY14P-201ENST00000303979 915 ntBASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 AP006294.2-201ENST00000641667 209 ntBASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 KRT8P9-201ENST00000558927 1449 ntBASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 KRT17P2-201ENST00000300992 1314 ntBASIC16.45■□□□□ 0.22
TRAV27A0A087WT01 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 CYP2D8P-201ENST00000433633 1490 ntBASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 TSPY15P-201ENST00000457163 923 ntBASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 AC010653.2-201ENST00000623505 997 ntBASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV27A0A087WT01 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV27A0A087WT01 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms