Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CDK11AQ9UQ88 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 STX6-204ENST00000542060 4809 ntTSL 2 BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 LAGE3P1-201ENST00000425356 484 ntBASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
CDK11AQ9UQ88 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 KRT18P3-201ENST00000451602 1288 ntBASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CDK11AQ9UQ88 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 UPF3AP3-201ENST00000420996 769 ntBASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 AC007967.3-201ENST00000434308 558 ntBASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 RNF151-202ENST00000569210 853 ntTSL 2 BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 TBC1D3P5-201ENST00000579401 1545 ntBASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CDK11AQ9UQ88 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 PTGES2-AS1-201ENST00000443493 2100 ntBASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
CDK11AQ9UQ88 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 UNC93B6-202ENST00000528242 690 ntBASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CDK11AQ9UQ88 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms