Protein–RNA interactions for Protein: Q9UK80

USP21, Ubiquitin carboxyl-terminal hydrolase 21, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP21Q9UK80 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
USP21Q9UK80 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP21Q9UK80 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
USP21Q9UK80 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.83■■□□□ 1.41
USP21Q9UK80 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP21Q9UK80 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC23.83■■□□□ 1.41
USP21Q9UK80 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.83■■□□□ 1.41
USP21Q9UK80 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
USP21Q9UK80 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.83■■□□□ 1.41
USP21Q9UK80 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.83■■□□□ 1.41
USP21Q9UK80 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
USP21Q9UK80 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
USP21Q9UK80 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
USP21Q9UK80 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.83■■□□□ 1.4
USP21Q9UK80 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
USP21Q9UK80 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.82■■□□□ 1.4
USP21Q9UK80 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 MIR661-201ENST00000384842 89 ntBASIC23.82■■□□□ 1.4
USP21Q9UK80 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC23.82■■□□□ 1.4
USP21Q9UK80 RHOQP3-201ENST00000437982 621 ntBASIC23.82■■□□□ 1.4
USP21Q9UK80 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 AC067863.1-201ENST00000494933 530 ntBASIC23.82■■□□□ 1.4
USP21Q9UK80 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC23.82■■□□□ 1.4
USP21Q9UK80 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23.82■■□□□ 1.4
USP21Q9UK80 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC23.82■■□□□ 1.4
USP21Q9UK80 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.82■■□□□ 1.4
USP21Q9UK80 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.82■■□□□ 1.4
USP21Q9UK80 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP21Q9UK80 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP21Q9UK80 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.81■■□□□ 1.4
USP21Q9UK80 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC23.81■■□□□ 1.4
USP21Q9UK80 TSPY16P-201ENST00000449843 468 ntBASIC23.81■■□□□ 1.4
USP21Q9UK80 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
USP21Q9UK80 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
USP21Q9UK80 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.81■■□□□ 1.4
USP21Q9UK80 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP21Q9UK80 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.81■■□□□ 1.4
USP21Q9UK80 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP21Q9UK80 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP21Q9UK80 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.8■■□□□ 1.4
USP21Q9UK80 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP21Q9UK80 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.8■■□□□ 1.4
USP21Q9UK80 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.8■■□□□ 1.4
USP21Q9UK80 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP21Q9UK80 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.8■■□□□ 1.4
USP21Q9UK80 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP21Q9UK80 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP21Q9UK80 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.8■■□□□ 1.4
USP21Q9UK80 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC23.8■■□□□ 1.4
USP21Q9UK80 TFAMP1-201ENST00000412727 736 ntBASIC23.8■■□□□ 1.4
USP21Q9UK80 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP21Q9UK80 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.8■■□□□ 1.4
USP21Q9UK80 NAA60-208ENST00000570819 833 ntTSL 2 BASIC23.8■■□□□ 1.4
USP21Q9UK80 CECR7-204ENST00000609932 568 ntTSL 2 BASIC23.8■■□□□ 1.4
USP21Q9UK80 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP21Q9UK80 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
USP21Q9UK80 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC23.8■■□□□ 1.4
USP21Q9UK80 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP21Q9UK80 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP21Q9UK80 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.79■■□□□ 1.4
USP21Q9UK80 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC23.79■■□□□ 1.4
USP21Q9UK80 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
USP21Q9UK80 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 AL121761.2-201ENST00000598007 1648 ntBASIC23.79■■□□□ 1.4
USP21Q9UK80 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP21Q9UK80 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
USP21Q9UK80 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.78■■□□□ 1.4
USP21Q9UK80 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP21Q9UK80 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP21Q9UK80 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP21Q9UK80 OR8S1-201ENST00000310194 1080 ntBASIC23.78■■□□□ 1.4
USP21Q9UK80 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
USP21Q9UK80 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
USP21Q9UK80 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
USP21Q9UK80 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
USP21Q9UK80 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.78■■□□□ 1.4
USP21Q9UK80 AC022494.1-201ENST00000466044 728 ntBASIC23.78■■□□□ 1.4
USP21Q9UK80 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP21Q9UK80 AL359881.2-201ENST00000602973 570 ntBASIC23.78■■□□□ 1.4
USP21Q9UK80 REXO1L3P-201ENST00000622202 1288 ntBASIC23.78■■□□□ 1.4
USP21Q9UK80 SERF2-217ENST00000630046 862 ntTSL 5 BASIC23.78■■□□□ 1.4
USP21Q9UK80 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms