Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
USP25Q9UHP3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP25Q9UHP3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 KRT8P50-201ENST00000562022 1438 ntBASIC20.81■□□□□ 0.92
USP25Q9UHP3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 Z99916.2-201ENST00000604037 246 ntBASIC20.81■□□□□ 0.92
USP25Q9UHP3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP25Q9UHP3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
USP25Q9UHP3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 SLC25A1P2-201ENST00000430693 912 ntBASIC20.8■□□□□ 0.92
USP25Q9UHP3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 AL023803.3-201ENST00000615559 522 ntBASIC20.8■□□□□ 0.92
USP25Q9UHP3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
USP25Q9UHP3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP25Q9UHP3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP25Q9UHP3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP25Q9UHP3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP25Q9UHP3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP25Q9UHP3 AP003071.4-201ENST00000562276 1284 ntBASIC20.79■□□□□ 0.92
USP25Q9UHP3 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP25Q9UHP3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP25Q9UHP3 AC141586.5-201ENST00000624546 2050 ntBASIC20.79■□□□□ 0.92
USP25Q9UHP3 AD000864.1-201ENST00000624076 2295 ntBASIC20.79■□□□□ 0.92
USP25Q9UHP3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP25Q9UHP3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.79■□□□□ 0.92
USP25Q9UHP3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP25Q9UHP3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 AC022211.2-201ENST00000585075 2527 ntBASIC20.78■□□□□ 0.92
USP25Q9UHP3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms