Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 MIR6786-201ENST00000616843 113 ntBASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCAL1Q9NZC9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 AL031985.4-201ENST00000642138 673 ntBASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 AP001094.4-201ENST00000579008 2176 ntBASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCAL1Q9NZC9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 AC034236.2-201ENST00000606662 1610 ntBASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 LINC01126-201ENST00000623515 1646 ntBASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 RARRES2P10-201ENST00000564312 460 ntBASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 AC026271.3-201ENST00000571884 352 ntBASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 MIR4674-201ENST00000582457 87 ntBASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 AL355312.1-201ENST00000407115 2176 ntBASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SMARCAL1Q9NZC9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 AC011676.5-201ENST00000624864 2660 ntBASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCAL1Q9NZC9 AL353807.1-201ENST00000427475 662 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms