Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 LINC00602-201ENST00000629776 2065 ntBASIC17.6■□□□□ 0.41
NDE1Q9NXR1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDE1Q9NXR1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 KRT18P55-202ENST00000578578 1546 ntBASIC17.59■□□□□ 0.41
NDE1Q9NXR1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 AC008687.6-201ENST00000596318 630 ntBASIC17.59■□□□□ 0.41
NDE1Q9NXR1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.59■□□□□ 0.41
NDE1Q9NXR1 PHGDH-209ENST00000641074 1780 ntBASIC17.58■□□□□ 0.41
NDE1Q9NXR1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.58■□□□□ 0.41
NDE1Q9NXR1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
NDE1Q9NXR1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDE1Q9NXR1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.58■□□□□ 0.41
NDE1Q9NXR1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NDE1Q9NXR1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 Z85996.1-201ENST00000494644 937 ntBASIC17.58■□□□□ 0.4
NDE1Q9NXR1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
NDE1Q9NXR1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDE1Q9NXR1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms