Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 AL117351.2-201ENST00000513571 157 ntBASIC21.01■□□□□ 0.95
RNF216Q9NWF9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 AC100814.1-201ENST00000606963 623 ntBASIC21.01■□□□□ 0.95
RNF216Q9NWF9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 AL023803.3-201ENST00000615559 522 ntBASIC21.01■□□□□ 0.95
RNF216Q9NWF9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF216Q9NWF9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF216Q9NWF9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RNF216Q9NWF9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21■□□□□ 0.95
RNF216Q9NWF9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 COPE-203ENST00000351079 907 ntTSL 2 BASIC21■□□□□ 0.95
RNF216Q9NWF9 TRAF3IP3-201ENST00000367023 1065 ntTSL 3 BASIC21■□□□□ 0.95
RNF216Q9NWF9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC21■□□□□ 0.95
RNF216Q9NWF9 AL645638.1-201ENST00000440519 361 ntBASIC21■□□□□ 0.95
RNF216Q9NWF9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 AC092647.4-201ENST00000457211 535 ntBASIC21■□□□□ 0.95
RNF216Q9NWF9 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21■□□□□ 0.95
RNF216Q9NWF9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC21■□□□□ 0.95
RNF216Q9NWF9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC21■□□□□ 0.95
RNF216Q9NWF9 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC21■□□□□ 0.95
RNF216Q9NWF9 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC21■□□□□ 0.95
RNF216Q9NWF9 AC007066.2-202ENST00000566531 914 ntBASIC21■□□□□ 0.95
RNF216Q9NWF9 AC078899.4-201ENST00000593952 1113 ntBASIC21■□□□□ 0.95
RNF216Q9NWF9 AC026585.1-201ENST00000619582 524 ntBASIC21■□□□□ 0.95
RNF216Q9NWF9 Z82202.1-201ENST00000623446 1880 ntBASIC21■□□□□ 0.95
RNF216Q9NWF9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21■□□□□ 0.95
RNF216Q9NWF9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF216Q9NWF9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 INGX-201ENST00000359239 846 ntBASIC20.99■□□□□ 0.95
RNF216Q9NWF9 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 MTND4P22-201ENST00000413116 1169 ntBASIC20.99■□□□□ 0.95
RNF216Q9NWF9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 AC092447.3-201ENST00000426027 686 ntBASIC20.99■□□□□ 0.95
RNF216Q9NWF9 TSPY5P-201ENST00000426936 936 ntBASIC20.99■□□□□ 0.95
RNF216Q9NWF9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF216Q9NWF9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RNF216Q9NWF9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF216Q9NWF9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF216Q9NWF9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF216Q9NWF9 SERPINA9-201ENST00000298845 1423 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF216Q9NWF9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
RNF216Q9NWF9 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF216Q9NWF9 AP000523.1-201ENST00000398242 1049 ntBASIC20.98■□□□□ 0.95
RNF216Q9NWF9 AC117947.1-201ENST00000427448 529 ntBASIC20.98■□□□□ 0.95
RNF216Q9NWF9 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms