Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 MIR1238-201ENST00000408483 83 ntBASIC16.42■□□□□ 0.22
HINT3Q9NQE9 MFAP1P1-201ENST00000442257 1255 ntBASIC16.42■□□□□ 0.22
HINT3Q9NQE9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 MIR3180-5-201ENST00000583743 153 ntBASIC16.42■□□□□ 0.22
HINT3Q9NQE9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 PP12613-201ENST00000424958 2230 ntBASIC16.42■□□□□ 0.22
HINT3Q9NQE9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 AC097488.1-201ENST00000507834 756 ntBASIC16.41■□□□□ 0.22
HINT3Q9NQE9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 PRORSD1P-202ENST00000563365 2154 ntBASIC16.41■□□□□ 0.22
HINT3Q9NQE9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 AC093010.1-201ENST00000473625 1624 ntBASIC16.41■□□□□ 0.22
HINT3Q9NQE9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HINT3Q9NQE9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.4■□□□□ 0.22
HINT3Q9NQE9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 AC036111.1-201ENST00000533973 1582 ntBASIC16.4■□□□□ 0.22
HINT3Q9NQE9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 MIR149-201ENST00000384879 89 ntBASIC16.4■□□□□ 0.22
HINT3Q9NQE9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 AC087499.1-201ENST00000418141 1075 ntBASIC16.4■□□□□ 0.22
HINT3Q9NQE9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 FITM1-202ENST00000559294 800 ntBASIC16.4■□□□□ 0.22
HINT3Q9NQE9 SLC25A1P4-201ENST00000567977 778 ntBASIC16.4■□□□□ 0.22
HINT3Q9NQE9 MIR4674-201ENST00000582457 87 ntBASIC16.4■□□□□ 0.22
HINT3Q9NQE9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.4■□□□□ 0.22
HINT3Q9NQE9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms