Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 AC139887.4-201ENST00000607877 719 ntBASIC19.48■□□□□ 0.71
SIX2Q9NPC8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 AC020763.4-201ENST00000623414 4170 ntBASIC19.48■□□□□ 0.71
SIX2Q9NPC8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX2Q9NPC8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 AC005521.1-201ENST00000393351 872 ntBASIC19.47■□□□□ 0.71
SIX2Q9NPC8 AC117947.1-201ENST00000427448 529 ntBASIC19.47■□□□□ 0.71
SIX2Q9NPC8 LIN28AP1-201ENST00000429574 405 ntBASIC19.47■□□□□ 0.71
SIX2Q9NPC8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 YBX1P2-201ENST00000489612 999 ntBASIC19.47■□□□□ 0.71
SIX2Q9NPC8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 AC034232.1-201ENST00000506026 1064 ntBASIC19.47■□□□□ 0.71
SIX2Q9NPC8 AC113404.2-201ENST00000507884 177 ntBASIC19.47■□□□□ 0.71
SIX2Q9NPC8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 AC140113.3-201ENST00000605663 199 ntBASIC19.47■□□□□ 0.71
SIX2Q9NPC8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 AC005363.2-201ENST00000618631 242 ntBASIC19.47■□□□□ 0.71
SIX2Q9NPC8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX2Q9NPC8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 HLA-F-220ENST00000434407 884 ntBASIC19.46■□□□□ 0.71
SIX2Q9NPC8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 AL136038.4-201ENST00000603606 1261 ntBASIC19.46■□□□□ 0.71
SIX2Q9NPC8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX2Q9NPC8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 STARP1-201ENST00000397973 869 ntBASIC19.45■□□□□ 0.7
SIX2Q9NPC8 AC211429.1-201ENST00000415277 523 ntBASIC19.45■□□□□ 0.7
SIX2Q9NPC8 AL137013.1-201ENST00000432946 1228 ntBASIC19.45■□□□□ 0.7
SIX2Q9NPC8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.45■□□□□ 0.7
SIX2Q9NPC8 ATP5G1P1-201ENST00000448724 379 ntBASIC19.45■□□□□ 0.7
SIX2Q9NPC8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 AC092597.1-201ENST00000487352 616 ntBASIC19.45■□□□□ 0.7
SIX2Q9NPC8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 AC024563.2-201ENST00000603282 481 ntBASIC19.45■□□□□ 0.7
SIX2Q9NPC8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIX2Q9NPC8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms