Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRF2Q9HAW0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 LIN28AP1-201ENST00000429574 405 ntBASIC17.37■□□□□ 0.37
BRF2Q9HAW0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRF2Q9HAW0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 AC113404.2-201ENST00000507884 177 ntBASIC17.36■□□□□ 0.37
BRF2Q9HAW0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 AC012306.2-201ENST00000609350 630 ntBASIC17.36■□□□□ 0.37
BRF2Q9HAW0 AC073912.3-201ENST00000624414 853 ntBASIC17.36■□□□□ 0.37
BRF2Q9HAW0 AC097493.4-201ENST00000641197 219 ntBASIC17.36■□□□□ 0.37
BRF2Q9HAW0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 AC005332.8-201ENST00000622750 2735 ntBASIC17.36■□□□□ 0.37
BRF2Q9HAW0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRF2Q9HAW0 AC132938.6-201ENST00000623828 1655 ntBASIC17.36■□□□□ 0.37
BRF2Q9HAW0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 ATP5G1P1-201ENST00000448724 379 ntBASIC17.35■□□□□ 0.37
BRF2Q9HAW0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 AC140113.3-201ENST00000605663 199 ntBASIC17.35■□□□□ 0.37
BRF2Q9HAW0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 KRT89P-201ENST00000620027 1478 ntBASIC17.35■□□□□ 0.37
BRF2Q9HAW0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRF2Q9HAW0 AC026471.1-201ENST00000564629 3026 ntBASIC17.34■□□□□ 0.37
BRF2Q9HAW0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRF2Q9HAW0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms