Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 MIR940-201ENST00000401276 94 ntBASIC18.71■□□□□ 0.59
BRD9Q9H8M2 RBM17P3-201ENST00000417687 1192 ntBASIC18.71■□□□□ 0.59
BRD9Q9H8M2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 SCARNA2-201ENST00000458748 420 ntBASIC18.71■□□□□ 0.59
BRD9Q9H8M2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 AC068472.1-201ENST00000474589 881 ntBASIC18.71■□□□□ 0.59
BRD9Q9H8M2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 RPL13AP23-201ENST00000480739 586 ntBASIC18.71■□□□□ 0.59
BRD9Q9H8M2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
BRD9Q9H8M2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.71■□□□□ 0.58
BRD9Q9H8M2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.7■□□□□ 0.58
BRD9Q9H8M2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 RPS2P28-201ENST00000314255 741 ntBASIC18.7■□□□□ 0.58
BRD9Q9H8M2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 FGFR3P6-201ENST00000457012 610 ntBASIC18.7■□□□□ 0.58
BRD9Q9H8M2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 AC009533.2-201ENST00000543664 586 ntBASIC18.7■□□□□ 0.58
BRD9Q9H8M2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 AL049840.3-201ENST00000602669 611 ntBASIC18.7■□□□□ 0.58
BRD9Q9H8M2 MIR7706-201ENST00000613747 67 ntBASIC18.7■□□□□ 0.58
BRD9Q9H8M2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 PMS2P7-201ENST00000506558 1336 ntBASIC18.7■□□□□ 0.58
BRD9Q9H8M2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRD9Q9H8M2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 ZNF259P1-201ENST00000407656 1365 ntBASIC18.69■□□□□ 0.58
BRD9Q9H8M2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 MIR1233-2-201ENST00000408138 82 ntBASIC18.69■□□□□ 0.58
BRD9Q9H8M2 MIR1233-1-201ENST00000408722 82 ntBASIC18.69■□□□□ 0.58
BRD9Q9H8M2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 FAM215A-202ENST00000632077 792 ntBASIC18.69■□□□□ 0.58
BRD9Q9H8M2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.69■□□□□ 0.58
BRD9Q9H8M2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRD9Q9H8M2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms