Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 RCN1P2-201ENST00000398357 915 ntBASIC19.55■□□□□ 0.72
NXF3Q9H4D5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 AC112698.1-201ENST00000510299 916 ntBASIC19.55■□□□□ 0.72
NXF3Q9H4D5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 MIR5100-201ENST00000579544 119 ntBASIC19.55■□□□□ 0.72
NXF3Q9H4D5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NXF3Q9H4D5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 SAPCD2P3-201ENST00000455031 850 ntBASIC19.54■□□□□ 0.72
NXF3Q9H4D5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 AL591684.3-201ENST00000605187 298 ntBASIC19.54■□□□□ 0.72
NXF3Q9H4D5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NXF3Q9H4D5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 AC125634.1-201ENST00000438758 1403 ntBASIC19.53■□□□□ 0.72
NXF3Q9H4D5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 AF238378.1-201ENST00000526806 358 ntBASIC19.53■□□□□ 0.72
NXF3Q9H4D5 AP002469.2-201ENST00000531724 424 ntBASIC19.53■□□□□ 0.72
NXF3Q9H4D5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 AL160237.2-201ENST00000556165 472 ntBASIC19.53■□□□□ 0.72
NXF3Q9H4D5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 AL121912.1-201ENST00000603683 238 ntBASIC19.53■□□□□ 0.72
NXF3Q9H4D5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 AC093010.1-201ENST00000473625 1624 ntBASIC19.53■□□□□ 0.72
NXF3Q9H4D5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NXF3Q9H4D5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NXF3Q9H4D5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.52■□□□□ 0.71
NXF3Q9H4D5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NXF3Q9H4D5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
NXF3Q9H4D5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms